Variant report

Variant	rs17157043
Chromosome Location	chr7:103529492-103529493
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10226733	0.81[ASN][1000 genomes]
rs10227303	0.83[ASN][1000 genomes]
rs10227818	0.83[ASN][1000 genomes]
rs10228185	0.83[ASN][1000 genomes]
rs10231740	0.83[ASN][1000 genomes]
rs10257331	0.83[ASN][1000 genomes]
rs10257449	0.83[ASN][1000 genomes]
rs10270408	0.81[ASN][1000 genomes]
rs12667097	0.96[ASN][1000 genomes]
rs17157005	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17157010	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17157057	0.87[ASN][1000 genomes]
rs17157072	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17157084	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17157104	0.96[ASN][1000 genomes]
rs17157114	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs35734631	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6979556	0.83[ASN][1000 genomes]
rs73712281	0.82[ASN][1000 genomes]
rs73712282	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103526800-103531000	Enhancers	K562	blood
2	chr7:103527800-103529600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr7:103528200-103530400	Enhancers	Fetal Heart	heart
4	chr7:103529200-103529600	Enhancers	Right Atrium	heart
5	chr7:103529200-103529800	Enhancers	Pancreas	Pancrea
6	chr7:103529200-103531200	Enhancers	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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