Variant report

Variant rs17163468
Chromosome Location chr1:222909948-222909949
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:222887400-222912000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:222887600-222912400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:222888200-222910200 Strong transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:222888200-222910400 Strong transcription Fetal Thymus thymus
5 chr1:222888400-222910000 Strong transcription Primary monocytes fromperipheralblood blood
6 chr1:222888400-222910000 Strong transcription Fetal Intestine Large intestine
7 chr1:222888400-222910200 Strong transcription Placenta Placenta
8 chr1:222888400-222910800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr1:222888600-222910400 Strong transcription Rectal Mucosa Donor 29 rectum
10 chr1:222888600-222910800 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr1:222888600-222911200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:222888600-222911400 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr1:222889000-222910000 Strong transcription Duodenum Mucosa Duodenum
14 chr1:222889000-222910200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:222889000-222911200 Strong transcription Liver Liver
16 chr1:222889000-222911400 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr1:222889200-222910000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:222889200-222910600 Strong transcription Adipose Nuclei Adipose
19 chr1:222889800-222910200 Strong transcription Duodenum Smooth Muscle Duodenum
20 chr1:222890000-222910000 Strong transcription Primary T cells fromperipheralblood blood
21 chr1:222891800-222910200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr1:222892000-222910200 Strong transcription Fetal Adrenal Gland Adrenal Gland
23 chr1:222892000-222911000 Strong transcription Primary T helper cells fromperipheralblood blood
24 chr1:222895200-222911600 Strong transcription Primary T cells from cord blood blood
25 chr1:222897400-222910600 Weak transcription Pancreas Pancrea
26 chr1:222900200-222910200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:222901200-222911800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr1:222901600-222911800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:222903200-222910200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:222903400-222912200 Weak transcription NHEK skin
31 chr1:222904000-222912800 Weak transcription Esophagus oesophagus
32 chr1:222904200-222910800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:222904600-222912800 Weak transcription Ovary ovary
34 chr1:222905000-222910600 Weak transcription Small Intestine intestine
35 chr1:222905200-222910800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:222905200-222911600 Weak transcription Colonic Mucosa Colon
37 chr1:222905200-222911800 Weak transcription Brain Substantia Nigra brain
38 chr1:222905600-222911200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:222905800-222910400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:222906200-222914000 Weak transcription K562 blood
41 chr1:222906600-222910000 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr1:222906600-222910200 Strong transcription Brain Cingulate Gyrus brain
43 chr1:222906800-222910800 Strong transcription Primary hematopoietic stem cells blood
44 chr1:222907400-222911200 Weak transcription Brain Angular Gyrus brain
45 chr1:222907600-222910000 Genic enhancers Primary B cells from peripheral blood blood
46 chr1:222907600-222911400 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:222907600-222913400 Weak transcription Placenta Amnion Placenta Amnion
48 chr1:222907800-222910400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr1:222908200-222910000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr1:222908200-222910000 Weak transcription HepG2 liver

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