The 2.0 version of rSNPBase

Variant report

Variant rs17171611
Chromosome Location chr7:39715958-39715959
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39672200-39722800 Weak transcription Hela-S3 cervix
2 chr7:39680000-39721600 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr7:39680800-39716400 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr7:39682800-39722000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr7:39683400-39716600 Weak transcription Primary T cells fromperipheralblood blood
6 chr7:39700000-39728200 Weak transcription Liver Liver
7 chr7:39701200-39718400 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr7:39701800-39716400 Weak transcription Duodenum Mucosa Duodenum
9 chr7:39701800-39720800 Weak transcription Lung lung
10 chr7:39701800-39721200 Weak transcription Thymus Thymus
11 chr7:39701800-39722600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr7:39701800-39739400 Weak transcription Esophagus oesophagus
13 chr7:39702000-39716600 Weak transcription Fetal Muscle Trunk muscle
14 chr7:39702000-39727400 Weak transcription Fetal Intestine Large intestine
15 chr7:39702200-39716400 Weak transcription Primary B cells from peripheral blood blood
16 chr7:39703800-39716600 Weak transcription Fetal Muscle Leg muscle
17 chr7:39704200-39716400 Weak transcription Fetal Intestine Small intestine
18 chr7:39704200-39716600 Weak transcription Psoas Muscle Psoas
19 chr7:39704400-39716200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr7:39704400-39717800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr7:39704800-39718600 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr7:39705200-39716200 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr7:39706400-39722800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr7:39706600-39716200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr7:39707200-39716000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr7:39707200-39727200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr7:39707200-39730000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr7:39707400-39718400 Weak transcription Primary hematopoietic stem cells blood
29 chr7:39707400-39718800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr7:39707400-39721000 Weak transcription Right Ventricle heart
31 chr7:39707800-39716000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr7:39708000-39718000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr7:39708000-39718600 Weak transcription Osteobl bone
34 chr7:39708000-39720400 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr7:39708000-39721400 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr7:39708000-39722400 Weak transcription Muscle Satellite Cultured Cells --
37 chr7:39708200-39720400 Weak transcription NHDF-Ad bronchial
38 chr7:39709600-39716200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr7:39710200-39716600 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr7:39710200-39722600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr7:39710400-39721800 Weak transcription Stomach Smooth Muscle stomach
42 chr7:39710800-39722800 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr7:39711600-39716200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr7:39712000-39722600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr7:39712200-39716600 Weak transcription HSMM muscle
46 chr7:39712200-39722600 Weak transcription NHEK skin
47 chr7:39712200-39722800 Weak transcription HMEC breast
48 chr7:39712600-39716600 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr7:39712600-39716600 Weak transcription HUVEC blood vessel
50 chr7:39712800-39716200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015