The 2.0 version of rSNPBase

Variant report

Variant rs17188930
Chromosome Location chr1:211473039-211473040
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211434400-211487000 Weak transcription Gastric stomach
2 chr1:211434600-211478200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:211434800-211474200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:211438800-211478800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr1:211439800-211478200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr1:211440800-211481800 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr1:211440800-211483600 Strong transcription Primary monocytes fromperipheralblood blood
8 chr1:211443000-211480000 Strong transcription Dnd41 blood
9 chr1:211443000-211480400 Strong transcription Placenta Placenta
10 chr1:211443200-211484000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:211443800-211478200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:211444400-211479000 Strong transcription Liver Liver
13 chr1:211444600-211478000 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:211444600-211479200 Strong transcription Primary T cells fromperipheralblood blood
15 chr1:211444800-211491200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:211445800-211486800 Weak transcription Esophagus oesophagus
17 chr1:211447800-211479200 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr1:211447800-211486200 Weak transcription Stomach Mucosa stomach
19 chr1:211449000-211479800 Strong transcription Fetal Thymus thymus
20 chr1:211449400-211482000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:211450400-211480200 Strong transcription Duodenum Mucosa Duodenum
22 chr1:211455000-211486800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:211455200-211478600 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr1:211456000-211478200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:211456600-211486000 Weak transcription Small Intestine intestine
26 chr1:211459000-211477600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:211459200-211477800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:211460000-211478200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:211460000-211478200 Strong transcription Fetal Intestine Large intestine
30 chr1:211460400-211479600 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr1:211460800-211479600 Strong transcription Primary B cells from peripheral blood blood
32 chr1:211461200-211499600 Weak transcription Psoas Muscle Psoas
33 chr1:211461400-211499600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:211461600-211499600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:211461800-211478600 Strong transcription HUES6 Cell Line embryonic stem cell
36 chr1:211462000-211476200 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr1:211462000-211480200 Strong transcription HSMM muscle
38 chr1:211462200-211477800 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr1:211462200-211478000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:211462200-211480200 Strong transcription Primary B cells from cord blood blood
41 chr1:211462400-211477000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:211462400-211477000 Strong transcription Skeletal Muscle Female skeletal muscle
43 chr1:211462600-211475800 Strong transcription Primary hematopoietic stem cells blood
44 chr1:211463800-211474200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:211464600-211477000 Weak transcription NHEK skin
46 chr1:211465200-211483200 Weak transcription Right Ventricle heart
47 chr1:211465600-211486800 Weak transcription Pancreas Pancrea
48 chr1:211465800-211486800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:211466200-211473400 Weak transcription Lung lung
50 chr1:211466200-211474000 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015