Variant report

Variant	rs17200067
Chromosome Location	chr6:31370722-31370723
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:26)
CpG islands
(count:61)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:26 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:31370662-31371677	PANC-1	pancreas:	n/a	n/a
2	POLR2A	chr6:31370225-31371676	PANC-1	pancreas:	n/a	n/a
3	TAF1	chr6:31370716-31371588	H1-hESC	embryonic stem cell:	n/a	n/a
4	MAX	chr6:31370706-31371920	A549	lung:	n/a	chr6:31371332-31371343 chr6:31371258-31371268
5	POLR2A	chr6:31370714-31371822	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr6:31369105-31372194	SK-N-MC	brain:	n/a	n/a
7	POLR2A	chr6:31370413-31371868	HUVEC	blood vessel:	n/a	n/a
8	RUNX3	chr6:31370475-31370996	GM12878	blood:	n/a	chr6:31370810-31370819 chr6:31370811-31370828
9	POLR2A	chr6:31370524-31371809	HepG2	liver:	n/a	n/a
10	MAX	chr6:31370676-31371830	ECC-1	luminal epithelium:	n/a	chr6:31371332-31371343 chr6:31371258-31371268
11	MYBL2	chr6:31370029-31371919	HepG2	liver:	n/a	n/a
12	E2F6	chr6:31370715-31371929	H1-hESC	embryonic stem cell:	n/a	chr6:31371277-31371286 chr6:31371505-31371514 chr6:31371050-31371059
13	CTCF	chr6:31370700-31370850	GM12873	blood:	n/a	n/a
14	MAX	chr6:31370616-31371922	HepG2	liver:	n/a	chr6:31371332-31371343 chr6:31371258-31371268
15	MTA3	chr6:31370677-31371354	GM12878	blood:	n/a	n/a
16	POLR2A	chr6:31370409-31371651	HUVEC	blood vessel:	n/a	n/a
17	MAX	chr6:31370705-31371894	H1-hESC	embryonic stem cell:	n/a	chr6:31371332-31371343 chr6:31371258-31371268
18	POLR2A	chr6:31370099-31371726	HUVEC	blood vessel:	n/a	n/a
19	RUNX3	chr6:31370614-31371112	GM12878	blood:	n/a	chr6:31370810-31370819 chr6:31370811-31370828
20	POLR2A	chr6:31370455-31371699	ECC-1	luminal epithelium:	n/a	n/a
21	NFIC	chr6:31370706-31371177	HepG2	liver:	n/a	n/a
22	MYBL2	chr6:31370718-31371591	HepG2	liver:	n/a	n/a
23	JUN	chr6:31366767-31371824	K562	blood:	n/a	chr6:31371337-31371347 chr6:31371337-31371347 chr6:31371337-31371347 chr6:31371337-31371347
24	POLR2A	chr6:31370605-31371869	K562	blood:	n/a	n/a
25	SIN3AK20	chr6:31370532-31371664	PANC-1	pancreas:	n/a	n/a
26	POLR2A	chr6:31370700-31371580	H1-hESC	embryonic stem cell:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31370700-31370750	HCPEpiC	choroid plexus:	n/a
2	chr6:31370700-31370750	HAEpiC	amniotic membrane:	n/a
3	chr6:31370700-31370750	U87	brain:	n/a
4	chr6:31370700-31370750	SKMC	muscle:	n/a
5	chr6:31370700-31370750	HRPEpiC	eye:	n/a
6	chr6:31370700-31370750	Caco-2	colon:	n/a
7	chr6:31370700-31370750	PANC-1	pancreas:	n/a
8	chr6:31370700-31370750	BJ	skin:	n/a
9	chr6:31370700-31370750	HEK293	kidney:	embryo
10	chr6:31370700-31370750	HMEC	breast:	n/a
11	chr6:31370700-31370750	Jurkat	blood:	n/a
12	chr6:31370700-31370750	LNCaP	prostate:	n/a
13	chr6:31370700-31370750	IMR90	lung:	fetal
14	chr6:31370700-31370750	ovcar-3	ovarian:	n/a
15	chr6:31370700-31370750	ProgFib	skin:	n/a
16	chr6:31370700-31370750	HPAEpiC	pulmonary alveolar:	n/a
17	chr6:31370700-31370750	SAEC	small airway:	n/a
18	chr6:31370700-31370750	AG04450	lung:	fetal
19	chr6:31370700-31370750	T-47D	breast:	n/a
20	chr6:31370700-31370750	HIPEpiC	eye:	n/a
21	chr6:31370700-31370750	MCF10A-Er-Src	breast:	n/a
22	chr6:31370700-31370750	HepG2	liver:	n/a
23	chr6:31370700-31370750	PrEC	prostate:	n/a
24	chr6:31370700-31370750	AG04449	skin:	fetal
25	chr6:31370700-31370750	SK-N-MC	brain:	n/a
26	chr6:31370700-31370750	AoSMC	blood vessel:	n/a
27	chr6:31370700-31370750	Hela-S3	cervix:	n/a
28	chr6:31370700-31370750	CMK	blood:	n/a
29	chr6:31370700-31370750	BE2_C	brain:	n/a
30	chr6:31370700-31370750	AG09319	gingival:	n/a
31	chr6:31370700-31370750	GM12892	blood:	n/a
32	chr6:31370700-31370750	HRCEpiC	kidney:	n/a
33	chr6:31370700-31370750	HCM	heart:	n/a
34	chr6:31370700-31370750	HRE	kidney:	n/a
35	chr6:31370700-31370750	K562	blood:	n/a
36	chr6:31370700-31370750	ECC-1	luminal epithelium:	n/a
37	chr6:31370700-31370750	NHDF-neo	bronchial:	n/a
38	chr6:31370700-31370750	GM19239	blood:	n/a
39	chr6:31370700-31370750	Hepatocyte	liver:	n/a
40	chr6:31370700-31370750	GM12891	blood:	n/a
41	chr6:31370700-31370750	HNPCEpiC	eye:	n/a
42	chr6:31370700-31370750	RPTEC	kidney:	n/a
43	chr6:31370700-31370750	AG09309	skin:	n/a
44	chr6:31370700-31370750	NHBE	bronchial:	n/a
45	chr6:31370700-31370750	MCF-7	breast:	n/a
46	chr6:31370700-31370750	GM12878	blood:	n/a
47	chr6:31370700-31370750	HL-60	blood:	n/a
48	chr6:31370700-31370750	HEEpiC	esophagus:	n/a
49	chr6:31370700-31370750	SK-N-SH_RA	brain:	n/a
50	chr6:31370700-31370750	HCF	heart:	n/a

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31370507..31371330-chr6:31465173..31465987,2	Hela-S3	cervix:
2	chr6:31368987..31371166-chr6:31508549..31510652,2	K562	blood:
3	chr6:31370403..31371134-chr6:31465031..31465964,2	MCF-7	breast:
4	chr6:31137284..31139502-chr6:31369827..31372777,2	K562	blood:
5	chr6:31367433..31369345-chr6:31370082..31372191,3	MCF-7	breast:
6	chr6:31369734..31371569-chr6:31409122..31410945,2	MCF-7	breast:
7	chr6:31366610..31369320-chr6:31369483..31372950,5	MCF-7	breast:
8	chr17:41465639..41466316-chr6:31370631..31371428,2	Hela-S3	cervix:

No data

Variant related genes	Relation type
MICA	TF binding region
ENSG00000199332	TF binding region
MICA	CpG island
ENSG00000199332	CpG island
ENSG00000206337	Chromatin interaction
ENSG00000204516	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000230174	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000188825	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204531	Chromatin interaction

Extended variants
information (count: 290 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12660741	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12661317	0.83[ASN][1000 genomes]
rs12664857	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs17193514	1.00[AFR][1000 genomes]
rs3819285	1.00[AFR][1000 genomes]
rs58805580	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:284 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3519970	chr6:30382942-31378788	Genic enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
2	esv3519971	chr6:30382942-31378788	Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1030 gene(s)	inside rSNPs	diseases
3	nsv1015372	chr6:30704734-31582152	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
4	nsv538173	chr6:30704734-31582152	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
5	nsv1029442	chr6:31006647-31449207	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	82 gene(s)	inside rSNPs	diseases
6	nsv428140	chr6:31028290-31462106	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	89 gene(s)	inside rSNPs	diseases
7	esv2758042	chr6:31028290-31497106	Weak transcription Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	101 gene(s)	inside rSNPs	diseases
8	esv2759414	chr6:31028290-31542308	Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	151 gene(s)	inside rSNPs	diseases
9	nsv1029569	chr6:31104401-31412740	Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	68 gene(s)	inside rSNPs	diseases
10	nsv538174	chr6:31104401-31412740	Flanking Bivalent TSS/Enh Active TSS Enhancers Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	68 gene(s)	inside rSNPs	diseases
11	nsv1015890	chr6:31131121-31449207	Enhancers Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
12	nsv538176	chr6:31131121-31449207	Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
13	nsv1015903	chr6:31162849-31412740	Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
14	nsv538178	chr6:31162849-31412740	Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
15	nsv1031682	chr6:31162849-31449207	Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	61 gene(s)	inside rSNPs	diseases
16	nsv538179	chr6:31162849-31449207	Strong transcription Genic enhancers Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	61 gene(s)	inside rSNPs	diseases
17	esv3381377	chr6:31192213-31498578	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	72 gene(s)	inside rSNPs	diseases
18	esv3340592	chr6:31192248-31498535	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	72 gene(s)	inside rSNPs	diseases
19	nsv538180	chr6:31206639-31386279	Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	42 gene(s)	inside rSNPs	diseases
20	nsv1029142	chr6:31206639-31449207	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	45 gene(s)	inside rSNPs	diseases
21	nsv1021052	chr6:31206639-31485736	Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	61 gene(s)	inside rSNPs	diseases
22	nsv1029526	chr6:31256354-31449207	Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	42 gene(s)	inside rSNPs	diseases
23	nsv538181	chr6:31256354-31449207	Active TSS Weak transcription Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	42 gene(s)	inside rSNPs	diseases
24	nsv1029508	chr6:31269776-31445712	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
25	nsv538182	chr6:31269776-31445712	Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
26	esv1830805	chr6:31269777-31450100	Flanking Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	41 gene(s)	inside rSNPs	diseases
27	esv33563	chr6:31275505-31453668	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
28	nsv601570	chr6:31276751-31451476	Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
29	nsv538184	chr6:31277798-31445712	Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	39 gene(s)	inside rSNPs	diseases
30	nsv1029678	chr6:31279535-31449207	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
31	nsv538185	chr6:31279535-31449207	Active TSS Flanking Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
32	nsv1022451	chr6:31279535-31485736	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
33	nsv601608	chr6:31280101-31389784	Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
34	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
35	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
36	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
37	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
38	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
39	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
40	nsv601660	chr6:31281770-31451476	Enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
41	nsv538186	chr6:31282952-31445712	Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	39 gene(s)	inside rSNPs	diseases
42	nsv869722	chr6:31287397-31461074	Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
43	nsv884319	chr6:31308988-31430721	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	37 gene(s)	inside rSNPs	diseases
44	esv3491002	chr6:31310527-31398831	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
45	esv3491003	chr6:31310527-31398831	Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
46	esv1828258	chr6:31316612-31456605	Weak transcription Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
47	nsv538187	chr6:31325961-31445712	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
48	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
49	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
50	nsv517441	chr6:31336100-31463963	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31367400-31372000	Active TSS	Aorta	Aorta
2	chr6:31367800-31371200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
3	chr6:31367800-31372600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr6:31368600-31371200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
5	chr6:31368600-31372400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
6	chr6:31368800-31371000	Flanking Active TSS	NHEK	skin
7	chr6:31368800-31371200	Flanking Active TSS	Hela-S3	cervix
8	chr6:31368800-31371200	Flanking Active TSS	HUVEC	blood vessel
9	chr6:31368800-31371200	Flanking Active TSS	Osteobl	bone
10	chr6:31368800-31372000	Flanking Active TSS	Dnd41	blood
11	chr6:31368800-31372400	Flanking Active TSS	Adipose Nuclei	Adipose
12	chr6:31368800-31372400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
13	chr6:31369000-31370800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr6:31369000-31370800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr6:31369000-31370800	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
16	chr6:31369000-31370800	Enhancers	Pancreas	Pancrea
17	chr6:31369000-31370800	Enhancers	Spleen	Spleen
18	chr6:31369000-31371000	Enhancers	Placenta Amnion	Placenta Amnion
19	chr6:31369000-31371200	Flanking Active TSS	NH-A	brain
20	chr6:31369200-31370800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
21	chr6:31369200-31371000	Flanking Active TSS	Stomach Smooth Muscle	stomach
22	chr6:31369400-31370800	Enhancers	Primary neutrophils fromperipheralblood	blood
23	chr6:31369600-31370800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr6:31369600-31370800	Flanking Active TSS	Colon Smooth Muscle	Colon
25	chr6:31369600-31370800	Flanking Active TSS	NHDF-Ad	bronchial
26	chr6:31369600-31371000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr6:31369600-31371200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr6:31369600-31371200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr6:31369600-31371200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
30	chr6:31369600-31371200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr6:31369600-31371200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr6:31369600-31372400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
33	chr6:31369800-31370800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr6:31369800-31371200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr6:31369800-31372200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
36	chr6:31369800-31372400	Flanking Active TSS	Primary hematopoietic stem cells	blood
37	chr6:31369800-31372400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
38	chr6:31370000-31370800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr6:31370000-31370800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
40	chr6:31370000-31370800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
41	chr6:31370000-31370800	Flanking Active TSS	Brain Hippocampus Middle	brain
42	chr6:31370000-31370800	Flanking Active TSS	Fetal Thymus	thymus
43	chr6:31370000-31370800	Flanking Active TSS	Ovary	ovary
44	chr6:31370000-31370800	Flanking Active TSS	Small Intestine	intestine
45	chr6:31370000-31370800	Flanking Active TSS	Stomach Mucosa	stomach
46	chr6:31370000-31371000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
47	chr6:31370000-31371000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
48	chr6:31370000-31371000	Flanking Active TSS	HSMM	muscle
49	chr6:31370000-31371200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr6:31370000-31371200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin

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