The 2.0 version of rSNPBase

Variant report

Variant rs17200375
Chromosome Location chr4:106968764-106968765
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106955000-106969600 Weak transcription NHLF lung
2 chr4:106956000-106969800 Weak transcription Muscle Satellite Cultured Cells --
3 chr4:106956200-106969600 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr4:106956200-106970000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr4:106956600-106969200 Weak transcription Fetal Muscle Leg muscle
6 chr4:106956800-106970800 Weak transcription HSMMtube muscle
7 chr4:106958400-106969200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr4:106958400-106969400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr4:106959200-106969000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr4:106959200-106969800 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr4:106959600-106969200 Weak transcription Pancreas Pancrea
12 chr4:106959600-106969600 Weak transcription Fetal Kidney kidney
13 chr4:106959600-106983400 Weak transcription HepG2 liver
14 chr4:106960600-106969400 Weak transcription Fetal Muscle Trunk muscle
15 chr4:106961600-106969600 Weak transcription Ovary ovary
16 chr4:106962400-106969400 Weak transcription NHDF-Ad bronchial
17 chr4:106962600-106970400 Weak transcription Small Intestine intestine
18 chr4:106962800-106969400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr4:106964200-106972000 Weak transcription Aorta Aorta
20 chr4:106965000-106969600 Weak transcription Brain Hippocampus Middle brain
21 chr4:106965000-106969600 Weak transcription Fetal Heart heart
22 chr4:106965200-106969400 Weak transcription Fetal Brain Female brain
23 chr4:106965400-106969600 Weak transcription Brain Substantia Nigra brain
24 chr4:106965800-106977600 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr4:106966200-106968800 Weak transcription Primary T cells fromperipheralblood blood
26 chr4:106966200-106970000 Weak transcription Brain Cingulate Gyrus brain
27 chr4:106966400-106968800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr4:106966600-106969800 Weak transcription Stomach Smooth Muscle stomach
29 chr4:106967000-106969800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr4:106967200-106970000 Weak transcription Placenta Placenta
31 chr4:106967400-106969000 Weak transcription Duodenum Mucosa Duodenum
32 chr4:106967600-106969400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr4:106967600-106969600 Weak transcription Osteobl bone
34 chr4:106967600-106970400 Weak transcription HSMM muscle
35 chr4:106967600-106983600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr4:106967600-106983800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr4:106967800-106969000 Weak transcription Fetal Lung lung
38 chr4:106967800-106969400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr4:106967800-106969400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr4:106967800-106969400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr4:106967800-106971200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr4:106967800-106971200 Weak transcription Liver Liver
43 chr4:106967800-106976400 Weak transcription Psoas Muscle Psoas
44 chr4:106967800-106984200 Weak transcription Primary hematopoietic stem cells blood
45 chr4:106967800-106994600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr4:106968000-106977200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr4:106968000-106977200 Weak transcription Primary T cells from cord blood blood
48 chr4:106968000-106984600 Weak transcription Primary B cells from cord blood blood
49 chr4:106968200-106971200 Enhancers Fetal Stomach stomach
50 chr4:106968400-106970000 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015