Variant report

Variant rs17201602
Chromosome Location chr6:32063681-32063682
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32057200-32066200 Strong transcription Placenta Amnion Placenta Amnion
2 chr6:32060000-32064200 Weak transcription Liver Liver
3 chr6:32061400-32063800 Weak transcription Brain Anterior Caudate brain
4 chr6:32061400-32063800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr6:32061600-32074800 Weak transcription Aorta Aorta
6 chr6:32061800-32064600 Weak transcription Right Atrium heart
7 chr6:32062400-32063800 Bivalent Enhancer Stomach Smooth Muscle stomach
8 chr6:32062400-32064800 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
9 chr6:32062400-32065200 Bivalent Enhancer Fetal Brain Male brain
10 chr6:32062400-32065200 Bivalent Enhancer Fetal Stomach stomach
11 chr6:32062600-32064000 Enhancers Pancreas Pancrea
12 chr6:32062600-32064000 Genic enhancers Right Ventricle heart
13 chr6:32062600-32064200 Bivalent Enhancer Fetal Lung lung
14 chr6:32062600-32064200 Bivalent Enhancer Fetal Muscle Leg muscle
15 chr6:32062600-32065000 Bivalent Enhancer Placenta Placenta
16 chr6:32062600-32074000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr6:32062600-32074000 Weak transcription NHDF-Ad bronchial
18 chr6:32062800-32063800 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
19 chr6:32062800-32064200 Enhancers Left Ventricle heart
20 chr6:32062800-32067200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:32063200-32063800 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
22 chr6:32063200-32065800 Strong transcription Ovary ovary
23 chr6:32063200-32066000 Bivalent Enhancer Fetal Muscle Trunk muscle
24 chr6:32063400-32063800 Enhancers Brain Substantia Nigra brain
25 chr6:32063400-32063800 Bivalent Enhancer Esophagus oesophagus
26 chr6:32063400-32064000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
27 chr6:32063400-32064000 Bivalent Enhancer Colon Smooth Muscle Colon
28 chr6:32063400-32064000 Bivalent Enhancer HMEC breast
29 chr6:32063400-32064200 ZNF genes & repeats Lung lung
30 chr6:32063400-32064800 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
31 chr6:32063400-32064800 Active TSS Brain Angular Gyrus brain
32 chr6:32063600-32063800 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
33 chr6:32063600-32063800 Bivalent Enhancer Colonic Mucosa Colon
34 chr6:32063600-32063800 Bivalent Enhancer Rectal Mucosa Donor 31 rectum
35 chr6:32063600-32063800 Bivalent/Poised TSS Rectal Smooth Muscle rectum
36 chr6:32063600-32063800 Bivalent Enhancer Stomach Mucosa stomach
37 chr6:32063600-32063800 Enhancers Spleen Spleen
38 chr6:32063600-32064000 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
39 chr6:32063600-32064000 Bivalent Enhancer HSMMtube muscle
40 chr6:32063600-32064200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
41 chr6:32063600-32064200 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
42 chr6:32063600-32064200 Transcr. at gene 5' and 3' Gastric stomach
43 chr6:32063600-32064200 Flanking Bivalent TSS/Enh NHEK skin
44 chr6:32063600-32064600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr6:32063600-32064800 Bivalent Enhancer Muscle Satellite Cultured Cells --
46 chr6:32063600-32064800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr6:32063600-32064800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
48 chr6:32063600-32065000 Bivalent Enhancer Primary T cells fromperipheralblood blood
49 chr6:32063600-32065000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin

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