Variant report
| Variant | rs17216781 |
|---|---|
| Chromosome Location | chr13:37441957-37441958 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:37395000-37458000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 2 | chr13:37396400-37446800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 3 | chr13:37396400-37446800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 4 | chr13:37397200-37446800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 5 | chr13:37397400-37446800 | Weak transcription | Fetal Brain Male | brain |
| 6 | chr13:37404600-37454600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 7 | chr13:37406200-37455400 | Weak transcription | Brain Germinal Matrix | brain |
| 8 | chr13:37414200-37452600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 9 | chr13:37422600-37446000 | Weak transcription | Colon Smooth Muscle | Colon |
| 10 | chr13:37425200-37446200 | Weak transcription | Brain Substantia Nigra | brain |
| 11 | chr13:37425600-37444600 | Weak transcription | Gastric | stomach |
| 12 | chr13:37427000-37446800 | Weak transcription | Brain Angular Gyrus | brain |
| 13 | chr13:37427800-37446600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 14 | chr13:37428000-37445000 | Weak transcription | Lung | lung |
| 15 | chr13:37428000-37445600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 16 | chr13:37428000-37446600 | Weak transcription | Brain Hippocampus Middle | brain |
| 17 | chr13:37434400-37450000 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr13:37435000-37447400 | Strong transcription | Fetal Muscle Leg | muscle |
| 19 | chr13:37435400-37447000 | Weak transcription | Fetal Heart | heart |
| 20 | chr13:37436200-37447200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 21 | chr13:37436400-37448200 | Weak transcription | Psoas Muscle | Psoas |
| 22 | chr13:37436600-37446000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 23 | chr13:37436800-37453400 | Weak transcription | Fetal Intestine Small | intestine |
| 24 | chr13:37436800-37462600 | Weak transcription | Osteobl | bone |
| 25 | chr13:37437000-37446000 | Weak transcription | Adipose Nuclei | Adipose |
| 26 | chr13:37437000-37448400 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 27 | chr13:37438000-37455000 | Weak transcription | Fetal Intestine Large | intestine |
| 28 | chr13:37438400-37442400 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 29 | chr13:37439000-37442400 | Strong transcription | HSMM | muscle |
| 30 | chr13:37439000-37443400 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 31 | chr13:37439200-37442400 | Strong transcription | HepG2 | liver |
| 32 | chr13:37439200-37447400 | Strong transcription | Fetal Lung | lung |
| 33 | chr13:37439400-37446200 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 34 | chr13:37439600-37453200 | Weak transcription | Right Ventricle | heart |
| 35 | chr13:37439800-37446600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 36 | chr13:37440000-37455400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 37 | chr13:37440000-37460200 | Weak transcription | Left Ventricle | heart |
| 38 | chr13:37440200-37442000 | Weak transcription | Fetal Stomach | stomach |
| 39 | chr13:37440200-37444400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 40 | chr13:37440200-37444400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 41 | chr13:37440200-37444600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 42 | chr13:37440200-37445800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 43 | chr13:37440200-37446600 | Weak transcription | Brain Anterior Caudate | brain |
| 44 | chr13:37440200-37455200 | Weak transcription | HSMMtube | muscle |
| 45 | chr13:37440600-37442000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 46 | chr13:37440600-37442000 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 47 | chr13:37440800-37454600 | Weak transcription | HUVEC | blood vessel |
| 48 | chr13:37441000-37444200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 49 | chr13:37441200-37442000 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 50 | chr13:37441200-37442800 | Strong transcription | Ovary | ovary |
