Variant report

Variant rs17250680
Chromosome Location chr9:139820363-139820364
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139782200-139835800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr9:139782200-139837000 Weak transcription Fetal Brain Male brain
3 chr9:139783000-139823600 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr9:139792000-139823400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr9:139792600-139823000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr9:139797000-139822400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr9:139797600-139825200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr9:139797800-139823400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
9 chr9:139797800-139837400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr9:139798000-139822000 Weak transcription NHDF-Ad bronchial
11 chr9:139798000-139824800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr9:139798000-139825200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:139798000-139825600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr9:139798000-139825800 Strong transcription Fetal Stomach stomach
15 chr9:139798200-139826000 Strong transcription Fetal Intestine Small intestine
16 chr9:139799200-139823600 Strong transcription Fetal Intestine Large intestine
17 chr9:139799400-139821800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr9:139799800-139821400 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr9:139800600-139822000 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr9:139806800-139822200 Strong transcription Primary B cells from peripheral blood blood
21 chr9:139807200-139821600 Strong transcription HepG2 liver
22 chr9:139807200-139823600 Strong transcription Thymus Thymus
23 chr9:139809200-139822000 Weak transcription Psoas Muscle Psoas
24 chr9:139810400-139834400 Weak transcription HSMM muscle
25 chr9:139812600-139821400 Weak transcription K562 blood
26 chr9:139813000-139821200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr9:139813600-139821800 Strong transcription Primary monocytes fromperipheralblood blood
28 chr9:139814000-139821200 Strong transcription Brain Inferior Temporal Lobe brain
29 chr9:139814000-139821800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr9:139814000-139821800 Strong transcription Colonic Mucosa Colon
31 chr9:139814000-139822000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
32 chr9:139814000-139822200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr9:139814000-139822400 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr9:139814000-139822600 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr9:139814000-139822800 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr9:139814000-139823000 Strong transcription Primary T helper naive cells fromperipheralblood blood
37 chr9:139814000-139823400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr9:139814000-139823400 Strong transcription Stomach Smooth Muscle stomach
39 chr9:139814000-139823600 Strong transcription Dnd41 blood
40 chr9:139814200-139820800 Strong transcription Spleen Spleen
41 chr9:139814200-139821200 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr9:139814200-139822000 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr9:139814200-139822600 Strong transcription H9 Cell Line embryonic stem cell
44 chr9:139814200-139822600 Strong transcription Liver Liver
45 chr9:139814200-139822600 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr9:139814200-139823200 Strong transcription iPS-15b Cell Line embryonic stem cell
47 chr9:139814200-139823400 Strong transcription Primary T cells from cord blood blood
48 chr9:139814200-139823800 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr9:139814200-139824600 Strong transcription Duodenum Mucosa Duodenum
50 chr9:139814200-139824800 Strong transcription H1 Cell Line embryonic stem cell

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