The 2.0 version of rSNPBase

Variant report

Variant rs17295487
Chromosome Location chr8:59792739-59792740
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59764200-59806400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr8:59771400-59811000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr8:59771600-59794000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr8:59772600-59794400 Weak transcription Small Intestine intestine
5 chr8:59773400-59808200 Weak transcription Thymus Thymus
6 chr8:59777800-59795000 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr8:59782200-59800200 Weak transcription Primary hematopoietic stem cells blood
8 chr8:59787000-59794600 Weak transcription Placenta Amnion Placenta Amnion
9 chr8:59788200-59803400 Weak transcription Gastric stomach
10 chr8:59789200-59794400 Weak transcription HSMMtube muscle
11 chr8:59789400-59793400 Weak transcription Fetal Thymus thymus
12 chr8:59789400-59794400 Weak transcription Brain Substantia Nigra brain
13 chr8:59789600-59792800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr8:59789600-59795600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr8:59789600-59796400 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr8:59789800-59794000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr8:59789800-59795800 Enhancers NHDF-Ad bronchial
18 chr8:59790000-59792800 Enhancers Hela-S3 cervix
19 chr8:59790000-59793000 Enhancers HUVEC blood vessel
20 chr8:59790200-59792800 Enhancers NHLF lung
21 chr8:59790400-59793800 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr8:59790400-59794000 Weak transcription Primary T cells from cord blood blood
23 chr8:59790600-59792800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr8:59790600-59793200 Enhancers Osteobl bone
25 chr8:59790600-59793600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr8:59790600-59794000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr8:59790600-59804000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr8:59790800-59794600 Weak transcription Rectal Smooth Muscle rectum
29 chr8:59790800-59795400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr8:59790800-59800400 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr8:59790800-59811200 Weak transcription Stomach Smooth Muscle stomach
32 chr8:59791200-59794600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr8:59791400-59811000 Weak transcription Brain Angular Gyrus brain
34 chr8:59791600-59792800 Enhancers HUES48 Cell Line embryonic stem cell
35 chr8:59791800-59794600 Weak transcription HMEC breast
36 chr8:59792000-59794400 Weak transcription Colon Smooth Muscle Colon
37 chr8:59792200-59793400 Strong transcription Dnd41 blood
38 chr8:59792400-59792800 Flanking Active TSS Muscle Satellite Cultured Cells --
39 chr8:59792600-59792800 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr8:59792600-59792800 Enhancers Aorta Aorta
41 chr8:59792600-59793000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr8:59792600-59793000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr8:59792600-59793000 Genic enhancers HSMM muscle
44 chr8:59792600-59794200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr8:59792600-59794400 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr8:59792600-59794400 Weak transcription NH-A brain

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Last update: Aug 31, 2015