Variant report

Variant rs1729978
Chromosome Location chr3:98310190-98310191
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:98287200-98310200 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr3:98287400-98310400 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr3:98292400-98310400 Weak transcription Small Intestine intestine
4 chr3:98292400-98311000 Weak transcription Fetal Brain Male brain
5 chr3:98292600-98310200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr3:98293000-98311800 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr3:98293200-98310400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr3:98294400-98310400 Weak transcription Colonic Mucosa Colon
9 chr3:98294400-98311000 Weak transcription Stomach Mucosa stomach
10 chr3:98294800-98311000 Weak transcription Esophagus oesophagus
11 chr3:98296000-98310200 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr3:98296200-98310400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:98296600-98311200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:98296800-98310800 Weak transcription NHLF lung
15 chr3:98297400-98310400 Weak transcription Hela-S3 cervix
16 chr3:98298200-98310800 Weak transcription HUVEC blood vessel
17 chr3:98299600-98311200 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr3:98300000-98311200 Weak transcription Placenta Amnion Placenta Amnion
19 chr3:98302400-98310200 Strong transcription iPS-20b Cell Line embryonic stem cell
20 chr3:98302600-98310200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr3:98302600-98310200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr3:98303800-98310200 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr3:98304400-98311600 Weak transcription Aorta Aorta
24 chr3:98304600-98310600 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr3:98304600-98310800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr3:98304600-98311400 Weak transcription HSMMtube muscle
27 chr3:98304800-98310200 Strong transcription HUES6 Cell Line embryonic stem cell
28 chr3:98304800-98311000 Weak transcription HSMM muscle
29 chr3:98305000-98311600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr3:98305200-98311000 Weak transcription Spleen Spleen
31 chr3:98305200-98311600 Weak transcription Gastric stomach
32 chr3:98305400-98311000 Weak transcription Thymus Thymus
33 chr3:98305600-98311000 Weak transcription Right Ventricle heart
34 chr3:98305800-98310400 Weak transcription Fetal Intestine Small intestine
35 chr3:98307000-98311000 Weak transcription A549 lung
36 chr3:98307400-98310200 Strong transcription H1 Cell Line embryonic stem cell
37 chr3:98307600-98310200 Strong transcription Fetal Adrenal Gland Adrenal Gland
38 chr3:98307600-98310200 Transcr. at gene 5' and 3' GM12878-XiMat blood
39 chr3:98307800-98310200 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr3:98307800-98310200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr3:98307800-98310400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr3:98308400-98310200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr3:98308400-98311000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr3:98308600-98310200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr3:98308600-98310200 Strong transcription Rectal Smooth Muscle rectum
46 chr3:98308800-98310200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr3:98308800-98310400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr3:98308800-98310400 Weak transcription Fetal Intestine Large intestine
49 chr3:98308800-98310600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:98308800-98311000 Weak transcription Primary B cells from cord blood blood

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