Variant report

Variant rs17302233
Chromosome Location chr15:59530307-59530308
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:59511400-59549200 Weak transcription Colonic Mucosa Colon
2 chr15:59515800-59566600 Weak transcription Pancreas Pancrea
3 chr15:59517000-59536600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr15:59517600-59546400 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr15:59517800-59564200 Weak transcription Fetal Muscle Trunk muscle
6 chr15:59521600-59534400 Weak transcription Placenta Placenta
7 chr15:59521600-59566400 Weak transcription Psoas Muscle Psoas
8 chr15:59524000-59541800 Weak transcription Placenta Amnion Placenta Amnion
9 chr15:59524000-59542200 Weak transcription Gastric stomach
10 chr15:59524000-59546200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr15:59524600-59569200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr15:59524600-59574600 Weak transcription Lung lung
13 chr15:59524800-59532800 Weak transcription Fetal Intestine Small intestine
14 chr15:59524800-59542200 Weak transcription Esophagus oesophagus
15 chr15:59525000-59531800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr15:59525000-59541800 Weak transcription Fetal Muscle Leg muscle
17 chr15:59525000-59546400 Weak transcription Stomach Smooth Muscle stomach
18 chr15:59525200-59532000 Weak transcription Brain Hippocampus Middle brain
19 chr15:59525200-59532400 Weak transcription Ovary ovary
20 chr15:59525200-59532800 Weak transcription Brain Cingulate Gyrus brain
21 chr15:59525200-59533000 Weak transcription Brain Inferior Temporal Lobe brain
22 chr15:59525200-59533000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr15:59525200-59533200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr15:59525200-59540200 Weak transcription Right Ventricle heart
25 chr15:59525200-59543000 Weak transcription Right Atrium heart
26 chr15:59525200-59547800 Weak transcription Colon Smooth Muscle Colon
27 chr15:59525200-59554000 Weak transcription Rectal Smooth Muscle rectum
28 chr15:59525200-59566600 Weak transcription Small Intestine intestine
29 chr15:59525200-59582000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr15:59525400-59534800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr15:59525400-59541000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr15:59525400-59542200 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr15:59527400-59534600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr15:59527400-59536000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr15:59527600-59532800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr15:59528000-59533000 Weak transcription HSMM muscle
37 chr15:59528400-59531000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr15:59528400-59532000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr15:59528600-59530600 Enhancers Primary B cells from peripheral blood blood
40 chr15:59528600-59530800 Enhancers Primary monocytes fromperipheralblood blood
41 chr15:59528800-59530400 Enhancers Primary B cells from cord blood blood
42 chr15:59528800-59530600 Enhancers HUVEC blood vessel
43 chr15:59529000-59530400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
44 chr15:59529000-59530600 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr15:59529000-59530600 Enhancers Primary hematopoietic stem cells short term culture blood
46 chr15:59529000-59530800 Enhancers HUES48 Cell Line embryonic stem cell
47 chr15:59529000-59530800 Enhancers iPS-18 Cell Line embryonic stem cell
48 chr15:59529200-59532000 Weak transcription Brain Substantia Nigra brain
49 chr15:59529200-59532000 Weak transcription HMEC breast
50 chr15:59529200-59532800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links