Variant report

Variant rs1730780
Chromosome Location chr4:3532327-3532328
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3494200-3533200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr4:3504000-3532400 Weak transcription Hela-S3 cervix
3 chr4:3508600-3532600 Weak transcription NHDF-Ad bronchial
4 chr4:3513400-3532600 Weak transcription Fetal Kidney kidney
5 chr4:3516200-3532600 Weak transcription Psoas Muscle Psoas
6 chr4:3521800-3532800 Weak transcription HSMMtube muscle
7 chr4:3522800-3532400 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr4:3525600-3533000 Weak transcription A549 lung
9 chr4:3526800-3532400 Weak transcription Placenta Amnion Placenta Amnion
10 chr4:3526800-3532800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr4:3526800-3532800 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr4:3527000-3532400 Weak transcription Primary hematopoietic stem cells blood
13 chr4:3527000-3532800 Weak transcription Aorta Aorta
14 chr4:3527200-3532600 Weak transcription Osteobl bone
15 chr4:3528200-3532800 Enhancers Fetal Heart heart
16 chr4:3528400-3532600 Genic enhancers Spleen Spleen
17 chr4:3528400-3533000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr4:3529000-3532600 Genic enhancers Primary hematopoietic stem cells short term culture blood
19 chr4:3529200-3532400 Strong transcription NHLF lung
20 chr4:3529200-3532800 Genic enhancers Gastric stomach
21 chr4:3530600-3532400 Genic enhancers Fetal Muscle Trunk muscle
22 chr4:3530800-3532400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr4:3530800-3532400 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr4:3530800-3532600 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr4:3530800-3532600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr4:3531000-3532800 Weak transcription H1 Cell Line embryonic stem cell
27 chr4:3531000-3533000 Enhancers Primary B cells from cord blood blood
28 chr4:3531000-3533200 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr4:3531200-3532400 Enhancers Brain Hippocampus Middle brain
30 chr4:3531200-3532400 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
31 chr4:3531200-3532600 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr4:3531200-3532600 Genic enhancers Ovary ovary
33 chr4:3531200-3533000 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr4:3531200-3534000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr4:3531400-3532400 Enhancers Primary T helper cells PMA-I stimulated --
36 chr4:3531400-3532400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr4:3531400-3532600 Enhancers Adipose Nuclei Adipose
38 chr4:3531400-3532600 Genic enhancers Lung lung
39 chr4:3531400-3532800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr4:3531400-3532800 Genic enhancers Fetal Stomach stomach
41 chr4:3531400-3533000 Weak transcription H9 Cell Line embryonic stem cell
42 chr4:3531400-3533000 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr4:3531400-3533000 Enhancers Liver Liver
44 chr4:3531400-3533600 Flanking Active TSS Brain Anterior Caudate brain
45 chr4:3531600-3532400 Enhancers Primary monocytes fromperipheralblood blood
46 chr4:3531600-3532400 Enhancers Primary T helper naive cells fromperipheralblood blood
47 chr4:3531600-3532400 Genic enhancers Cortex derived primary cultured neurospheres brain
48 chr4:3531600-3532400 Enhancers Pancreas Pancrea
49 chr4:3531600-3532800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr4:3531600-3532800 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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