Variant report

Variant	rs1731914
Chromosome Location	chr7:137125122-137125123
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs1669027	1.00[YRI][hapmap]
rs1731915	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1731946	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv869820	chr7:136990386-137347718	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
3	nsv1027868	chr7:137004690-137311653	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
4	nsv539134	chr7:137004690-137311653	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137117000-137126600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr7:137124400-137125400	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr7:137124400-137125600	Enhancers	Brain Angular Gyrus	brain
4	chr7:137124400-137125600	Enhancers	Brain Anterior Caudate	brain
5	chr7:137124400-137125800	Enhancers	Brain Cingulate Gyrus	brain
6	chr7:137124400-137125800	Enhancers	Brain Hippocampus Middle	brain
7	chr7:137124400-137125800	Enhancers	Brain Substantia Nigra	brain
8	chr7:137124400-137126000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr7:137124400-137131200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr7:137124600-137125200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr7:137124600-137125200	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr7:137124600-137125200	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr7:137124600-137125200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr7:137124600-137125200	Enhancers	Fetal Muscle Trunk	muscle
15	chr7:137124600-137125200	Enhancers	Fetal Stomach	stomach
16	chr7:137124600-137125400	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr7:137124600-137125400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr7:137124600-137125600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr7:137124600-137125600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr7:137124600-137125600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr7:137124600-137125800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr7:137124600-137125800	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr7:137124600-137125800	Enhancers	Fetal Lung	lung
24	chr7:137124600-137126400	Enhancers	NHDF-Ad	bronchial
25	chr7:137124800-137125200	Enhancers	Fetal Heart	heart
26	chr7:137124800-137125600	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr7:137124800-137125600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
28	chr7:137124800-137125600	Enhancers	Adipose Nuclei	Adipose
29	chr7:137125000-137125200	Enhancers	Brain Inferior Temporal Lobe	brain
30	chr7:137125000-137130400	Weak transcription	Fetal Muscle Leg	muscle
31	chr7:137125000-137147600	Weak transcription	Aorta	Aorta

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