Variant report

Variant	rs1732843
Chromosome Location	chr12:120824423-120824424
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1179455	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2701639	1.00[EUR][1000 genomes]
rs2701640	1.00[EUR][1000 genomes]
rs3847970	1.00[EUR][1000 genomes]
rs73416957	1.00[EUR][1000 genomes]
rs7965260	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs9657928	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899555	chr12:120519124-120840522	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	499 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120815600-120825800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr12:120820400-120826600	Weak transcription	Ovary	ovary
3	chr12:120820400-120826800	Weak transcription	Right Atrium	heart
4	chr12:120821000-120826400	Weak transcription	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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