Variant report

Variant	rs17331406
Chromosome Location	chr10:90011263-90011264
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs17335362	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467414	chr10:90006507-90042154	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89994400-90013800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr10:90004200-90013200	Weak transcription	Fetal Muscle Trunk	muscle
3	chr10:90005200-90013400	Weak transcription	Pancreas	Pancrea
4	chr10:90005800-90017200	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr10:90006400-90013600	Weak transcription	NH-A	brain
6	chr10:90006600-90012800	Weak transcription	Right Atrium	heart
7	chr10:90006600-90013000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr10:90007000-90012200	Weak transcription	Psoas Muscle	Psoas
9	chr10:90007000-90013000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr10:90007200-90012400	Weak transcription	Fetal Muscle Leg	muscle
11	chr10:90007200-90012600	Weak transcription	Thymus	Thymus
12	chr10:90007400-90011600	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr10:90007400-90012200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr10:90007800-90012400	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr10:90009600-90013400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr10:90009800-90013000	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr10:90010400-90013400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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