The 2.0 version of rSNPBase

Variant report

Variant rs17354833
Chromosome Location chr5:111815824-111815825
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:14 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111812200-111816800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr5:111812400-111816800 Weak transcription Brain Substantia Nigra brain
3 chr5:111813800-111816600 Enhancers Placenta Placenta
4 chr5:111813800-111817000 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr5:111814000-111816800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr5:111814200-111816200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr5:111814200-111816200 Enhancers Placenta Amnion Placenta Amnion
8 chr5:111814200-111816600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:111814400-111816200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr5:111814400-111816600 Enhancers HMEC breast
11 chr5:111814800-111816000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr5:111814800-111816400 Enhancers NHEK skin
13 chr5:111815600-111816600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr5:111815800-111819400 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015