Variant report

Variant	rs17356524
Chromosome Location	chr6:36262927-36262928
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12196677	1.00[JPT][hapmap]
rs12197499	1.00[JPT][hapmap]
rs12208229	1.00[CHB][hapmap]
rs12526665	1.00[ASW][hapmap]
rs13196184	1.00[JPT][hapmap]
rs2032506	1.00[JPT][hapmap]
rs4236048	1.00[JPT][hapmap]
rs6457892	1.00[JPT][hapmap]
rs6457894	1.00[JPT][hapmap]
rs7747793	1.00[JPT][hapmap]
rs7754042	1.00[CHB][hapmap]
rs7775197	1.00[JPT][hapmap]
rs9296177	1.00[JPT][hapmap]
rs9470224	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428481	chr6:36219000-36365746	Bivalent/Poised TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:36258600-36269200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr6:36258800-36263800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr6:36259200-36263600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:36259200-36263600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:36259800-36269200	Weak transcription	Lung	lung
6	chr6:36259800-36270000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr6:36260200-36263800	Weak transcription	Hela-S3	cervix
8	chr6:36260400-36264400	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr6:36260400-36264600	Weak transcription	Primary B cells from cord blood	blood
10	chr6:36260600-36270000	Weak transcription	Spleen	Spleen
11	chr6:36260600-36280400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr6:36260800-36270200	Weak transcription	Fetal Intestine Small	intestine
13	chr6:36261600-36265400	Genic enhancers	Primary neutrophils fromperipheralblood	blood
14	chr6:36262400-36264400	Weak transcription	Fetal Brain Male	brain
15	chr6:36262800-36263200	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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