Variant report

Variant	rs17367434
Chromosome Location	chr3:146311026-146311027
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10513298	0.83[AFR][1000 genomes]
rs17367309	0.83[AFR][1000 genomes]
rs17367522	0.83[AFR][1000 genomes]
rs17368735	0.83[AFR][1000 genomes]
rs17432215	0.83[AFR][1000 genomes]
rs17433714	0.83[AFR][1000 genomes]
rs28469401	0.89[ASN][1000 genomes]
rs4621299	0.89[ASN][1000 genomes]
rs56046201	0.83[AFR][1000 genomes]
rs6794178	0.83[AFR][1000 genomes]
rs73156912	0.83[AFR][1000 genomes]
rs73156972	0.83[AFR][1000 genomes]
rs73156981	0.83[AFR][1000 genomes]
rs73156988	0.83[AFR][1000 genomes]
rs73156990	0.83[AFR][1000 genomes]
rs7613246	0.83[AFR][1000 genomes]
rs7625618	0.83[AFR][1000 genomes]
rs9814319	0.89[ASN][1000 genomes]
rs9822212	1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9884041	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432489	chr3:146271370-146323969	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv877623	chr3:146278616-146319368	Enhancers Weak transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:146298600-146313200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr3:146302600-146316400	Weak transcription	Placenta Amnion	Placenta Amnion

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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