The 2.0 version of rSNPBase

Variant report

Variant rs17375006
Chromosome Location chr2:173966210-173966211
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173941600-173969600 Weak transcription Spleen Spleen
2 chr2:173942800-173971400 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr2:173943000-173971200 Weak transcription HSMMtube muscle
4 chr2:173943400-173974200 Weak transcription Fetal Intestine Large intestine
5 chr2:173945400-173991200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:173952000-173973400 Weak transcription Hela-S3 cervix
7 chr2:173952200-173971400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr2:173953000-173968000 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr2:173953800-173991400 Weak transcription Primary hematopoietic stem cells blood
10 chr2:173955400-173970200 Weak transcription Duodenum Mucosa Duodenum
11 chr2:173955600-173968600 Weak transcription Placenta Placenta
12 chr2:173955600-173971800 Weak transcription Lung lung
13 chr2:173955600-173972000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:173955600-173984000 Weak transcription Gastric stomach
15 chr2:173955800-173977200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr2:173956200-173969000 Weak transcription NH-A brain
17 chr2:173956600-173971600 Weak transcription Fetal Thymus thymus
18 chr2:173957000-173966800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr2:173957000-173974400 Weak transcription Fetal Stomach stomach
20 chr2:173957600-173972000 Weak transcription Fetal Muscle Trunk muscle
21 chr2:173957800-173973400 Weak transcription Fetal Lung lung
22 chr2:173957800-173983800 Weak transcription Fetal Muscle Leg muscle
23 chr2:173958000-173983800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:173958200-173967000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr2:173958200-173973800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr2:173958200-173974000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:173959800-173974200 Weak transcription HepG2 liver
28 chr2:173961400-173973400 Weak transcription Fetal Intestine Small intestine
29 chr2:173961800-173970800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr2:173961800-173974400 Weak transcription NHLF lung
31 chr2:173962000-173971000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:173962200-173983800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:173964400-173966600 Enhancers GM12878-XiMat blood
34 chr2:173964400-173968000 Weak transcription Primary T cells from cord blood blood
35 chr2:173964600-173968400 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr2:173964600-173971200 Weak transcription HSMM muscle
37 chr2:173964600-173971600 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr2:173965000-173966600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr2:173965000-173967200 Weak transcription Ovary ovary
40 chr2:173965000-173974000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr2:173965000-173987400 Weak transcription Primary monocytes fromperipheralblood blood
42 chr2:173965200-173966600 Weak transcription Right Ventricle heart
43 chr2:173965200-173967800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr2:173965200-173969400 Weak transcription Left Ventricle heart
45 chr2:173965200-173969600 Weak transcription Right Atrium heart
46 chr2:173965400-173966600 Weak transcription Psoas Muscle Psoas
47 chr2:173965400-173967000 Weak transcription HUVEC blood vessel
48 chr2:173965400-173967000 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr2:173965400-173967200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr2:173965400-173967400 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015