Variant report

Variant	rs1739802
Chromosome Location	chr6:71832433-71832434
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1739801	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1775549	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1832948	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1832949	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2096216	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2096217	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2105358	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9455335	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9455336	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71824400-71835400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr6:71831800-71833400	Enhancers	HMEC	breast
3	chr6:71832000-71832800	Enhancers	Primary B cells from peripheral blood	blood
4	chr6:71832200-71832600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:71832200-71832600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links