Variant report

Variant rs17399721
Chromosome Location chr1:86173943-86173944
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86171600-86174600 Active TSS GM12878-XiMat blood
2 chr1:86172000-86174800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:86172200-86174600 Active TSS K562 blood
4 chr1:86172200-86174600 Active TSS NHLF lung
5 chr1:86172400-86174000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
6 chr1:86172400-86174600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:86172400-86174800 Active TSS HUES6 Cell Line embryonic stem cell
8 chr1:86172400-86174800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:86172400-86175000 Active TSS A549 lung
10 chr1:86172600-86174400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:86172600-86174600 Active TSS ES-WA7 Cell Line embryonic stem cell
12 chr1:86172600-86174600 Active TSS H9 Cell Line embryonic stem cell
13 chr1:86172600-86174600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:86172600-86174600 Active TSS HUES64 Cell Line embryonic stem cell
15 chr1:86172600-86174600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:86172600-86174600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:86172600-86174600 Active TSS Ovary ovary
18 chr1:86172600-86174600 Active TSS Right Atrium heart
19 chr1:86172600-86174800 Active TSS ES-I3 Cell Line embryonic stem cell
20 chr1:86172600-86174800 Active TSS iPS-20b Cell Line embryonic stem cell
21 chr1:86172600-86174800 Active TSS HSMM muscle
22 chr1:86172600-86174800 Active TSS HSMMtube muscle
23 chr1:86172800-86174400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr1:86172800-86174400 Active TSS HUES48 Cell Line embryonic stem cell
25 chr1:86172800-86174400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:86172800-86174400 Active TSS Muscle Satellite Cultured Cells --
27 chr1:86172800-86174600 Active TSS H1 Cell Line embryonic stem cell
28 chr1:86172800-86174600 Active TSS Primary hematopoietic stem cells short term culture blood
29 chr1:86172800-86174600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:86172800-86174600 Active TSS Brain Germinal Matrix brain
31 chr1:86172800-86174600 Active TSS Brain Inferior Temporal Lobe brain
32 chr1:86172800-86174600 Active TSS Colonic Mucosa Colon
33 chr1:86172800-86174600 Active TSS Fetal Intestine Large intestine
34 chr1:86172800-86174600 Active TSS Fetal Intestine Small intestine
35 chr1:86172800-86174600 Active TSS Right Ventricle heart
36 chr1:86172800-86174600 Active TSS NHDF-Ad bronchial
37 chr1:86172800-86174800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:86172800-86174800 Active TSS iPS-18 Cell Line embryonic stem cell
39 chr1:86172800-86174800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:86172800-86174800 Active TSS Aorta Aorta
41 chr1:86173000-86174200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
42 chr1:86173000-86174400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:86173000-86174400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:86173000-86174400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:86173000-86174400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:86173000-86174400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
47 chr1:86173000-86174400 Active TSS Lung lung
48 chr1:86173000-86174400 Bivalent/Poised TSS HepG2 liver
49 chr1:86173000-86174400 Active TSS HMEC breast
50 chr1:86173000-86174400 Active TSS NHEK skin

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