Variant report
| Variant | rs17401498 |
|---|---|
| Chromosome Location | chr11:10499472-10499473 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:10473200-10512000 | Weak transcription | Aorta | Aorta |
| 2 | chr11:10478400-10500000 | Weak transcription | Fetal Intestine Small | intestine |
| 3 | chr11:10478400-10502800 | Weak transcription | Pancreas | Pancrea |
| 4 | chr11:10478800-10511600 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr11:10479000-10502800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 6 | chr11:10479800-10519400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr11:10483400-10500600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 8 | chr11:10484200-10509600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 9 | chr11:10484200-10514800 | Weak transcription | Colonic Mucosa | Colon |
| 10 | chr11:10485000-10515200 | Weak transcription | Liver | Liver |
| 11 | chr11:10485200-10501000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 12 | chr11:10485600-10500400 | Weak transcription | Adipose Nuclei | Adipose |
| 13 | chr11:10485600-10500800 | Weak transcription | Fetal Muscle Leg | muscle |
| 14 | chr11:10485600-10508200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 15 | chr11:10485800-10511600 | Weak transcription | Osteobl | bone |
| 16 | chr11:10486000-10504800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 17 | chr11:10486200-10501200 | Weak transcription | NHEK | skin |
| 18 | chr11:10486600-10502600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 19 | chr11:10486800-10509600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 20 | chr11:10486800-10515600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 21 | chr11:10487200-10503000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 22 | chr11:10487200-10506200 | Weak transcription | Dnd41 | blood |
| 23 | chr11:10487400-10500400 | Weak transcription | Esophagus | oesophagus |
| 24 | chr11:10489000-10512600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 25 | chr11:10489200-10500000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 26 | chr11:10494200-10510000 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 27 | chr11:10494400-10500200 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 28 | chr11:10494600-10509600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 29 | chr11:10495000-10509600 | Strong transcription | Primary B cells from cord blood | blood |
| 30 | chr11:10495000-10528000 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
| 31 | chr11:10495200-10510800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 32 | chr11:10495200-10530800 | Strong transcription | Primary T cells from cord blood | blood |
| 33 | chr11:10495400-10509800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 34 | chr11:10495400-10511800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr11:10495600-10510600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 36 | chr11:10495600-10516400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 37 | chr11:10495800-10500200 | Weak transcription | Gastric | stomach |
| 38 | chr11:10495800-10529800 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 39 | chr11:10496000-10503000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 40 | chr11:10496200-10509800 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 41 | chr11:10496400-10505800 | Weak transcription | Placenta | Placenta |
| 42 | chr11:10496400-10524000 | Strong transcription | Primary hematopoietic stem cells | blood |
| 43 | chr11:10496600-10499800 | Weak transcription | Spleen | Spleen |
| 44 | chr11:10496600-10505200 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 45 | chr11:10496600-10507200 | Strong transcription | Fetal Thymus | thymus |
| 46 | chr11:10496600-10529000 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 47 | chr11:10496800-10500400 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 48 | chr11:10496800-10501400 | Enhancers | Brain Cingulate Gyrus | brain |
| 49 | chr11:10497000-10500200 | Weak transcription | NHLF | lung |
| 50 | chr11:10497200-10500200 | Strong transcription | Lung | lung |
