Variant report

Variant rs17427875
Chromosome Location chr7:27225558-27225559
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27222000-27226600 Bivalent/Poised TSS Fetal Kidney kidney
2 chr7:27222400-27226200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
3 chr7:27222400-27226600 Active TSS HSMMtube muscle
4 chr7:27222600-27226200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
5 chr7:27222600-27226200 Bivalent/Poised TSS Small Intestine intestine
6 chr7:27222600-27226400 Active TSS NHDF-Ad bronchial
7 chr7:27222800-27225600 Bivalent Enhancer Spleen Spleen
8 chr7:27222800-27225800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
9 chr7:27222800-27225800 Bivalent Enhancer Fetal Stomach stomach
10 chr7:27222800-27225800 Active TSS Osteobl bone
11 chr7:27222800-27226200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr7:27223000-27225600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
13 chr7:27223000-27225600 Bivalent Enhancer Fetal Intestine Large intestine
14 chr7:27223000-27225800 Bivalent/Poised TSS Rectal Smooth Muscle rectum
15 chr7:27223000-27226200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr7:27223200-27225600 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
17 chr7:27223400-27226000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr7:27223400-27226400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr7:27223400-27229200 Active TSS Colon Smooth Muscle Colon
20 chr7:27223600-27225600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
21 chr7:27224000-27225800 Bivalent Enhancer Primary B cells from peripheral blood blood
22 chr7:27224000-27226000 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
23 chr7:27224000-27226200 Bivalent/Poised TSS Fetal Intestine Small intestine
24 chr7:27224200-27226000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
25 chr7:27224400-27225800 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
26 chr7:27224400-27226000 Bivalent Enhancer H1 Cell Line embryonic stem cell
27 chr7:27224400-27226000 Bivalent Enhancer Left Ventricle heart
28 chr7:27224400-27226000 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
29 chr7:27224400-27226200 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
30 chr7:27224600-27225600 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
31 chr7:27224600-27225600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
32 chr7:27224600-27225800 Bivalent Enhancer Primary mononuclear cells fromperipheralblood Blood
33 chr7:27224600-27225800 Bivalent Enhancer Duodenum Mucosa Duodenum
34 chr7:27224600-27225800 Bivalent Enhancer Esophagus oesophagus
35 chr7:27224600-27225800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
36 chr7:27224600-27225800 Weak transcription A549 lung
37 chr7:27224600-27226000 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
38 chr7:27224600-27226000 Bivalent Enhancer Fetal Thymus thymus
39 chr7:27224600-27226000 ZNF genes & repeats Pancreas Pancrea
40 chr7:27224800-27225600 Bivalent Enhancer Stomach Smooth Muscle stomach
41 chr7:27224800-27225800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr7:27224800-27226200 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
43 chr7:27225000-27225600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
44 chr7:27225000-27225600 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
45 chr7:27225000-27225800 ZNF genes & repeats Gastric stomach
46 chr7:27225000-27226000 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
47 chr7:27225000-27226000 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
48 chr7:27225000-27226000 Flanking Bivalent TSS/Enh Placenta Placenta
49 chr7:27225000-27226200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
50 chr7:27225000-27226600 Bivalent Enhancer Primary T cells fromperipheralblood blood

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