Variant report

Variant	rs1743770
Chromosome Location	chr6:70224454-70224455
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10214499	0.86[ASN][1000 genomes]
rs13202718	0.86[ASN][1000 genomes]
rs13204099	0.86[ASN][1000 genomes]
rs2573010	0.86[ASN][1000 genomes]
rs2757772	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs514510	0.86[ASN][1000 genomes]
rs56880395	0.86[ASN][1000 genomes]
rs9454766	0.86[ASN][1000 genomes]
rs9454770	0.86[ASN][1000 genomes]
rs9454771	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021249	chr6:70186260-70237744	Active TSS Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
2	esv11472	chr6:70188989-70277993	Enhancers Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
3	nsv432922	chr6:70209079-70237636	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
4	nsv432923	chr6:70209079-70238111	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
5	nsv521077	chr6:70214844-70279345	Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
6	nsv528131	chr6:70216262-70233708	Active TSS	n/a	n/a	inside rSNPs	diseases
7	nsv521380	chr6:70216262-70261307	Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
8	nsv516477	chr6:70217661-70233708	Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70224200-70225800	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr6:70224400-70225800	Active TSS	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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