The 2.0 version of rSNPBase

Variant report

Variant rs17452391
Chromosome Location chr1:157978473-157978474
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:157965200-157979400 Weak transcription Thymus Thymus
2 chr1:157965800-157983200 Weak transcription Dnd41 blood
3 chr1:157966400-157979800 Enhancers Ovary ovary
4 chr1:157966600-157979600 Enhancers Adipose Nuclei Adipose
5 chr1:157968800-157982200 Enhancers Placenta Placenta
6 chr1:157969000-157988000 Weak transcription Psoas Muscle Psoas
7 chr1:157969800-157979200 Enhancers Colon Smooth Muscle Colon
8 chr1:157969800-157982200 Enhancers Fetal Heart heart
9 chr1:157970800-157980200 Enhancers Fetal Lung lung
10 chr1:157971800-157978800 Enhancers HSMMtube muscle
11 chr1:157973200-157979000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:157973400-157978600 Enhancers NHDF-Ad bronchial
13 chr1:157973600-157979200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr1:157973600-157980000 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr1:157973800-157979000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:157974400-157979000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:157975000-157981800 Enhancers Cortex derived primary cultured neurospheres brain
18 chr1:157975200-157978600 Genic enhancers Fetal Stomach stomach
19 chr1:157975200-157980600 Enhancers Left Ventricle heart
20 chr1:157975200-157980600 Enhancers Lung lung
21 chr1:157975400-157981600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:157975400-157982000 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr1:157975400-157996800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:157975600-157979800 Enhancers Duodenum Smooth Muscle Duodenum
25 chr1:157975800-157980600 Enhancers Fetal Brain Male brain
26 chr1:157976000-157979800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:157976000-157981600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr1:157976000-157981800 Enhancers Right Atrium heart
29 chr1:157976200-157979400 Enhancers NH-A brain
30 chr1:157976200-157981800 Enhancers Fetal Muscle Trunk muscle
31 chr1:157976200-157982000 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr1:157976200-157982000 Enhancers Placenta Amnion Placenta Amnion
33 chr1:157976200-157982600 Enhancers HUES64 Cell Line embryonic stem cell
34 chr1:157976200-157982800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
35 chr1:157976400-157978800 Enhancers Spleen Spleen
36 chr1:157976400-157979600 Enhancers HMEC breast
37 chr1:157976400-157979800 Enhancers Fetal Brain Female brain
38 chr1:157976400-157981400 Genic enhancers Fetal Intestine Small intestine
39 chr1:157976400-157981800 Enhancers H1 Cell Line embryonic stem cell
40 chr1:157976400-157981800 Enhancers HUES6 Cell Line embryonic stem cell
41 chr1:157976400-157982000 Enhancers iPS-20b Cell Line embryonic stem cell
42 chr1:157976600-157980400 Enhancers Fetal Muscle Leg muscle
43 chr1:157976600-157982400 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr1:157976800-157978800 Enhancers HSMM muscle
45 chr1:157976800-157979000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:157976800-157979600 Enhancers HUVEC blood vessel
47 chr1:157976800-157980600 Enhancers ES-WA7 Cell Line embryonic stem cell
48 chr1:157976800-157981600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:157976800-157981800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:157977000-157979000 Enhancers Right Ventricle heart

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Last update: Aug 31, 2015