Variant report
Variant | rs17453675 |
---|---|
Chromosome Location | chr2:9754407-9754408 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:9696800-9767600 | Weak transcription | Gastric | stomach |
2 | chr2:9741400-9760000 | Weak transcription | Fetal Kidney | kidney |
3 | chr2:9742200-9757000 | Weak transcription | Fetal Muscle Trunk | muscle |
4 | chr2:9742800-9757800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
5 | chr2:9744600-9755200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
6 | chr2:9744800-9766800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
7 | chr2:9747800-9760200 | Weak transcription | Placenta Amnion | Placenta Amnion |
8 | chr2:9748000-9757000 | Enhancers | Brain Hippocampus Middle | brain |
9 | chr2:9748600-9755000 | Weak transcription | Fetal Stomach | stomach |
10 | chr2:9748600-9756400 | Enhancers | Brain Substantia Nigra | brain |
11 | chr2:9748600-9765600 | Weak transcription | H1 Cell Line | embryonic stem cell |
12 | chr2:9748600-9766600 | Weak transcription | Aorta | Aorta |
13 | chr2:9748600-9767600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
14 | chr2:9748800-9758800 | Weak transcription | Thymus | Thymus |
15 | chr2:9748800-9761200 | Weak transcription | H9 Cell Line | embryonic stem cell |
16 | chr2:9748800-9763400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
17 | chr2:9749000-9755000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
18 | chr2:9749000-9756800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
19 | chr2:9749000-9757800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
20 | chr2:9749000-9764600 | Weak transcription | Lung | lung |
21 | chr2:9749000-9769200 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
22 | chr2:9749200-9764000 | Weak transcription | Fetal Brain Male | brain |
23 | chr2:9749200-9768000 | Weak transcription | Stomach Mucosa | stomach |
24 | chr2:9749400-9762800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
25 | chr2:9749600-9758000 | Weak transcription | Primary B cells from peripheral blood | blood |
26 | chr2:9749600-9768200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
27 | chr2:9750000-9755800 | Weak transcription | Brain Germinal Matrix | brain |
28 | chr2:9750000-9755800 | Strong transcription | Dnd41 | blood |
29 | chr2:9750000-9758000 | Weak transcription | HUVEC | blood vessel |
30 | chr2:9750200-9758400 | Genic enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
31 | chr2:9750200-9758600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
32 | chr2:9750400-9756000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
33 | chr2:9750800-9756400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
34 | chr2:9751000-9757000 | Enhancers | Colon Smooth Muscle | Colon |
35 | chr2:9751000-9757000 | Enhancers | Skeletal Muscle Female | skeletal muscle |
36 | chr2:9751000-9759000 | Genic enhancers | A549 | lung |
37 | chr2:9751200-9754800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
38 | chr2:9751200-9755200 | Strong transcription | Primary B cells from cord blood | blood |
39 | chr2:9751400-9755000 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
40 | chr2:9751600-9755000 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
41 | chr2:9751600-9756000 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
42 | chr2:9751600-9758800 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
43 | chr2:9751800-9756200 | Enhancers | Fetal Heart | heart |
44 | chr2:9751800-9758800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
45 | chr2:9752200-9757000 | Enhancers | Brain Angular Gyrus | brain |
46 | chr2:9752200-9757200 | Weak transcription | Primary T cells fromperipheralblood | blood |
47 | chr2:9752200-9757800 | Weak transcription | Left Ventricle | heart |
48 | chr2:9752200-9762200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
49 | chr2:9752200-9768200 | Weak transcription | Colonic Mucosa | Colon |
50 | chr2:9752400-9754600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |