Variant report

Variant rs17458459
Chromosome Location chr12:40492437-40492438
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:40464400-40493200 Weak transcription Colon Smooth Muscle Colon
2 chr12:40466400-40498200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:40471400-40496800 Weak transcription Stomach Smooth Muscle stomach
4 chr12:40474400-40497000 Weak transcription Ovary ovary
5 chr12:40475400-40497200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr12:40475600-40496400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr12:40476400-40497400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr12:40476600-40492600 Weak transcription Lung lung
9 chr12:40476600-40498400 Weak transcription Fetal Stomach stomach
10 chr12:40476800-40497800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr12:40477000-40497000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr12:40477200-40495200 Weak transcription Hela-S3 cervix
13 chr12:40477400-40496800 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr12:40478600-40492600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr12:40479000-40493400 Weak transcription Duodenum Mucosa Duodenum
16 chr12:40479200-40493200 Weak transcription Fetal Heart heart
17 chr12:40480200-40493400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr12:40480600-40496800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr12:40481200-40492800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr12:40482000-40497800 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr12:40482400-40493400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr12:40485000-40492600 Weak transcription Fetal Intestine Large intestine
23 chr12:40485600-40496800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr12:40486000-40492600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr12:40487000-40497400 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr12:40488200-40492600 Weak transcription Left Ventricle heart
27 chr12:40488200-40498600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr12:40488400-40492600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr12:40488400-40492600 Weak transcription Pancreas Pancrea
30 chr12:40491000-40497000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr12:40492000-40494600 Enhancers Rectal Mucosa Donor 31 rectum
32 chr12:40492000-40495400 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr12:40492200-40493600 Enhancers Pancreatic Islets Pancreatic Islet
34 chr12:40492400-40492800 Genic enhancers Fetal Intestine Small intestine
35 chr12:40492400-40493000 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr12:40492400-40493000 Enhancers K562 blood
37 chr12:40492400-40498600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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