Variant report

Variant rs17472294
Chromosome Location chr7:27228286-27228287
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27223400-27229200 Active TSS Colon Smooth Muscle Colon
2 chr7:27225200-27229400 Flanking Active TSS HUVEC blood vessel
3 chr7:27225400-27229000 Active TSS HSMM muscle
4 chr7:27225600-27228600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
5 chr7:27225600-27229800 Flanking Active TSS Muscle Satellite Cultured Cells --
6 chr7:27225800-27229200 Active TSS Rectal Smooth Muscle rectum
7 chr7:27226000-27229200 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
8 chr7:27226400-27232400 Weak transcription NHDF-Ad bronchial
9 chr7:27226800-27229400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
10 chr7:27226800-27230000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
11 chr7:27226800-27236000 Weak transcription A549 lung
12 chr7:27227000-27228800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr7:27227000-27228800 Bivalent/Poised TSS Fetal Intestine Small intestine
14 chr7:27227000-27229200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
15 chr7:27227200-27228400 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
16 chr7:27227200-27228800 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
17 chr7:27227200-27229000 Bivalent Enhancer Fetal Thymus thymus
18 chr7:27227200-27229200 Bivalent Enhancer H1 Cell Line embryonic stem cell
19 chr7:27227200-27229200 Bivalent Enhancer Primary B cells from peripheral blood blood
20 chr7:27227200-27233800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
21 chr7:27227400-27228400 Flanking Bivalent TSS/Enh Placenta Placenta
22 chr7:27227400-27228600 Flanking Active TSS Colonic Mucosa Colon
23 chr7:27227400-27228800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
24 chr7:27227400-27229000 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
25 chr7:27227400-27229000 Bivalent Enhancer Fetal Stomach stomach
26 chr7:27227400-27229000 Bivalent Enhancer Stomach Mucosa stomach
27 chr7:27227400-27229200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
28 chr7:27227400-27229200 Bivalent Enhancer Esophagus oesophagus
29 chr7:27227400-27229200 Active TSS HSMMtube muscle
30 chr7:27227400-27229400 Bivalent Enhancer Spleen Spleen
31 chr7:27227600-27228400 Bivalent Enhancer Fetal Intestine Large intestine
32 chr7:27227600-27228400 Bivalent/Poised TSS Small Intestine intestine
33 chr7:27227600-27228600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
34 chr7:27227600-27228800 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
35 chr7:27227600-27228800 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
36 chr7:27227600-27228800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr7:27227600-27228800 Bivalent Enhancer Liver Liver
38 chr7:27227600-27229000 Flanking Bivalent TSS/Enh Primary T helper naive cells fromperipheralblood blood
39 chr7:27227600-27229000 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
40 chr7:27227600-27229000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr7:27227600-27229200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
42 chr7:27227600-27229200 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
43 chr7:27227600-27229600 Bivalent Enhancer Lung lung
44 chr7:27227800-27228400 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr7:27227800-27228400 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
46 chr7:27227800-27228400 Bivalent Enhancer Dnd41 blood
47 chr7:27227800-27228400 Flanking Bivalent TSS/Enh Hela-S3 cervix
48 chr7:27227800-27228600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
49 chr7:27227800-27228600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells blood
50 chr7:27227800-27228600 Flanking Bivalent TSS/Enh Primary T helper cells PMA-I stimulated --

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