Variant report

Variant rs17474745
Chromosome Location chr1:222958309-222958310
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:222947200-222959200 Weak transcription Fetal Brain Male brain
2 chr1:222948200-222961600 Weak transcription Primary B cells from cord blood blood
3 chr1:222951400-222959400 Weak transcription Stomach Mucosa stomach
4 chr1:222951600-222959600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr1:222953400-222968000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:222956400-222960000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:222957000-222958600 Enhancers Brain Hippocampus Middle brain
8 chr1:222957000-222959000 Enhancers Brain Cingulate Gyrus brain
9 chr1:222957200-222960400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:222957200-222960400 Enhancers Hela-S3 cervix
11 chr1:222957400-222961600 Enhancers Fetal Lung lung
12 chr1:222957600-222959000 Weak transcription Fetal Muscle Leg muscle
13 chr1:222957600-222959000 Weak transcription Placenta Placenta
14 chr1:222957800-222958600 Enhancers Dnd41 blood
15 chr1:222957800-222960200 Enhancers HUVEC blood vessel
16 chr1:222958000-222958600 Enhancers Brain Inferior Temporal Lobe brain
17 chr1:222958000-222959000 Enhancers Brain Substantia Nigra brain
18 chr1:222958000-222959400 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:222958200-222958600 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr1:222958200-222958800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:222958200-222959200 Enhancers Fetal Kidney kidney
22 chr1:222958200-222959400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:222958200-222959400 Weak transcription Brain Anterior Caudate brain

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