The 2.0 version of rSNPBase

Variant report

Variant rs174765
Chromosome Location chr22:29727866-29727867
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:29707400-29740000 Weak transcription Hela-S3 cervix
2 chr22:29711800-29733400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr22:29719400-29730600 Weak transcription HepG2 liver
4 chr22:29719600-29730800 Weak transcription HMEC breast
5 chr22:29720600-29732200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr22:29720600-29740000 Weak transcription Fetal Brain Male brain
7 chr22:29721200-29732000 Weak transcription K562 blood
8 chr22:29721400-29738200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr22:29721400-29746800 Strong transcription Fetal Intestine Small intestine
10 chr22:29721800-29728200 Genic enhancers Fetal Muscle Trunk muscle
11 chr22:29721800-29734400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr22:29721800-29739600 Strong transcription Colonic Mucosa Colon
13 chr22:29721800-29756800 Strong transcription Primary T cells from cord blood blood
14 chr22:29722000-29732400 Strong transcription Gastric stomach
15 chr22:29722000-29732800 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr22:29722000-29739200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr22:29722000-29739800 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr22:29722000-29747000 Strong transcription Duodenum Mucosa Duodenum
19 chr22:29722000-29759200 Strong transcription Dnd41 blood
20 chr22:29722000-29759800 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr22:29722200-29730000 Strong transcription Liver Liver
22 chr22:29722200-29733000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr22:29722200-29737000 Strong transcription Pancreas Pancrea
24 chr22:29722200-29738000 Strong transcription Primary neutrophils fromperipheralblood blood
25 chr22:29722200-29738000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr22:29722200-29739400 Strong transcription Fetal Brain Female brain
27 chr22:29722200-29741000 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr22:29722200-29755800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr22:29722200-29756400 Strong transcription Thymus Thymus
30 chr22:29722200-29756600 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr22:29722200-29759800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr22:29722400-29728000 Genic enhancers Fetal Muscle Leg muscle
33 chr22:29722400-29729000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr22:29722400-29733000 Weak transcription Stomach Mucosa stomach
35 chr22:29722400-29735000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr22:29722400-29736600 Weak transcription Fetal Heart heart
37 chr22:29722400-29739400 Strong transcription Brain Germinal Matrix brain
38 chr22:29722400-29740400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr22:29722400-29740400 Strong transcription iPS-15b Cell Line embryonic stem cell
40 chr22:29722400-29756800 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr22:29722400-29758400 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr22:29722600-29728000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr22:29722600-29728400 Strong transcription H1 Cell Line embryonic stem cell
44 chr22:29722600-29729200 Strong transcription GM12878-XiMat blood
45 chr22:29722600-29729400 Strong transcription Rectal Smooth Muscle rectum
46 chr22:29722600-29732400 Strong transcription Left Ventricle heart
47 chr22:29722600-29738000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr22:29722600-29738400 Strong transcription Aorta Aorta
49 chr22:29722600-29739800 Strong transcription Primary T helper naive cells fromperipheralblood blood
50 chr22:29722600-29751200 Strong transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015