Variant report

Variant rs17480469
Chromosome Location chr13:52607075-52607076
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52588000-52609200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr13:52588000-52617400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr13:52595000-52611200 Weak transcription Psoas Muscle Psoas
4 chr13:52596600-52614000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr13:52599000-52611000 Weak transcription Fetal Brain Male brain
6 chr13:52600000-52609800 Weak transcription Stomach Mucosa stomach
7 chr13:52600200-52613800 Weak transcription Colon Smooth Muscle Colon
8 chr13:52600200-52613800 Weak transcription Small Intestine intestine
9 chr13:52600400-52627600 Weak transcription HSMMtube muscle
10 chr13:52600800-52609600 Weak transcription Esophagus oesophagus
11 chr13:52600800-52611400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr13:52601000-52619400 Weak transcription Brain Hippocampus Middle brain
13 chr13:52601200-52609400 Weak transcription HMEC breast
14 chr13:52601200-52610000 Weak transcription Primary B cells from cord blood blood
15 chr13:52601600-52609600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr13:52603200-52613400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr13:52603400-52608400 Weak transcription Adipose Nuclei Adipose
18 chr13:52603600-52608200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr13:52603600-52610000 Weak transcription Fetal Kidney kidney
20 chr13:52603600-52610200 Weak transcription Left Ventricle heart
21 chr13:52603800-52607400 Weak transcription Osteobl bone
22 chr13:52603800-52609600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr13:52603800-52610200 Weak transcription Gastric stomach
24 chr13:52604000-52608400 Weak transcription Brain Germinal Matrix brain
25 chr13:52604000-52612400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr13:52604000-52615200 Weak transcription Fetal Intestine Large intestine
27 chr13:52604200-52607200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr13:52604200-52608000 Weak transcription Pancreas Pancrea
29 chr13:52604200-52608200 Weak transcription Fetal Lung lung
30 chr13:52604200-52608600 Weak transcription Primary hematopoietic stem cells blood
31 chr13:52604200-52608600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr13:52604200-52610200 Weak transcription K562 blood
33 chr13:52604200-52610800 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr13:52604200-52611600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr13:52604200-52613400 Weak transcription Right Ventricle heart
36 chr13:52604400-52608800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr13:52604400-52609600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr13:52604400-52610400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr13:52604400-52611000 Weak transcription Primary T cells from cord blood blood
40 chr13:52604400-52612000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr13:52604600-52607200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr13:52604800-52607200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr13:52604800-52609000 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr13:52605200-52609600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr13:52605400-52607600 Weak transcription HSMM muscle
46 chr13:52605400-52611800 Weak transcription Fetal Thymus thymus
47 chr13:52605600-52607200 Weak transcription Fetal Brain Female brain
48 chr13:52605800-52614400 Weak transcription Thymus Thymus
49 chr13:52606000-52607600 Weak transcription Placenta Placenta
50 chr13:52606000-52609400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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