Variant report

Variant rs17493206
Chromosome Location chr18:25548385-25548386
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25530800-25555400 Weak transcription Brain Cingulate Gyrus brain
2 chr18:25531200-25593600 Weak transcription Fetal Kidney kidney
3 chr18:25536400-25578200 Weak transcription Fetal Brain Male brain
4 chr18:25536600-25554200 Weak transcription HSMMtube muscle
5 chr18:25536800-25574200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr18:25540200-25564600 Weak transcription Ovary ovary
7 chr18:25540600-25554600 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr18:25540600-25555200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr18:25540800-25555800 Weak transcription Brain Angular Gyrus brain
10 chr18:25540800-25564400 Weak transcription Brain Hippocampus Middle brain
11 chr18:25540800-25576400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr18:25541600-25552400 Weak transcription Dnd41 blood
13 chr18:25541600-25555400 Weak transcription Aorta Aorta
14 chr18:25542800-25574400 Strong transcription Cortex derived primary cultured neurospheres brain
15 chr18:25543400-25551800 Weak transcription Fetal Brain Female brain
16 chr18:25544000-25555000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr18:25544400-25572400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr18:25545200-25556000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr18:25545400-25554400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr18:25545400-25554600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr18:25545400-25554600 Weak transcription Brain Germinal Matrix brain
22 chr18:25545400-25555000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr18:25545400-25564800 Weak transcription HUVEC blood vessel
24 chr18:25545600-25554400 Weak transcription Brain Anterior Caudate brain
25 chr18:25545600-25554600 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr18:25545600-25588600 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr18:25546800-25551400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr18:25547000-25548600 Enhancers Osteobl bone
29 chr18:25547400-25548600 Enhancers Fetal Lung lung
30 chr18:25547400-25554800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr18:25547600-25548400 Enhancers Muscle Satellite Cultured Cells --
32 chr18:25547600-25548600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr18:25547600-25548800 Enhancers HepG2 liver
34 chr18:25547600-25549600 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr18:25547600-25552400 Weak transcription HSMM muscle
36 chr18:25547800-25548600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr18:25547800-25548800 Genic enhancers NH-A brain
38 chr18:25547800-25549600 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr18:25547800-25549600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr18:25547800-25554200 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr18:25548000-25548400 Enhancers Right Ventricle heart
42 chr18:25548000-25548600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr18:25548000-25548600 Flanking Active TSS Fetal Heart heart
44 chr18:25548000-25548600 Enhancers Placenta Amnion Placenta Amnion
45 chr18:25548000-25548600 Flanking Active TSS A549 lung
46 chr18:25548000-25548600 Enhancers NHLF lung
47 chr18:25548000-25549400 Strong transcription Liver Liver
48 chr18:25548200-25548600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr18:25548200-25548600 Enhancers Left Ventricle heart
50 chr18:25548200-25549400 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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