Variant report

Variant rs17495512
Chromosome Location chr6:106970207-106970208
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:106961000-106981000 Weak transcription Lung lung
2 chr6:106961000-107001400 Weak transcription Gastric stomach
3 chr6:106962000-106972800 Weak transcription Colon Smooth Muscle Colon
4 chr6:106963400-106972800 Weak transcription HUVEC blood vessel
5 chr6:106964600-106972600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr6:106964800-106973000 Weak transcription Stomach Mucosa stomach
7 chr6:106964800-106991000 Weak transcription Spleen Spleen
8 chr6:106964800-107029800 Weak transcription Small Intestine intestine
9 chr6:106966400-106972000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr6:106966800-106971200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
11 chr6:106967200-106970600 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
12 chr6:106967600-106970600 Strong transcription Fetal Intestine Small intestine
13 chr6:106967600-106971800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:106967800-106975600 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr6:106968000-106971200 Active TSS Primary T helper naive cells from peripheral blood blood
16 chr6:106968000-106972800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr6:106968200-106970800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:106968200-106971200 Flanking Active TSS Primary B cells from peripheral blood blood
19 chr6:106968200-106972800 Weak transcription Hela-S3 cervix
20 chr6:106968200-106973000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr6:106968200-106976400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr6:106968200-106980800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr6:106968400-106971600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
24 chr6:106968400-106972800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr6:106968400-106972800 Weak transcription Osteobl bone
26 chr6:106968600-106971200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
27 chr6:106968600-106971600 Active TSS Primary T killer naive cells fromperipheralblood blood
28 chr6:106968600-106972800 Weak transcription NH-A brain
29 chr6:106968800-106970400 Weak transcription Liver Liver
30 chr6:106968800-106970400 Weak transcription NHDF-Ad bronchial
31 chr6:106968800-106970800 Active TSS Primary T cells fromperipheralblood blood
32 chr6:106968800-106971800 Active TSS Primary T killer memory cells from peripheral blood blood
33 chr6:106968800-106971800 Active TSS GM12878-XiMat blood
34 chr6:106968800-106973000 Active TSS Primary T helper cells PMA-I stimulated --
35 chr6:106968800-106973000 Weak transcription NHLF lung
36 chr6:106968800-106973200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
37 chr6:106968800-106975800 Weak transcription HSMM muscle
38 chr6:106969000-106970400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:106969000-106970400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:106969000-106971200 Flanking Active TSS Primary monocytes fromperipheralblood blood
41 chr6:106969000-106971200 Active TSS Thymus Thymus
42 chr6:106969000-106971400 Flanking Active TSS Primary hematopoietic stem cells blood
43 chr6:106969000-106971600 Weak transcription Placenta Placenta
44 chr6:106969000-106973000 Weak transcription Muscle Satellite Cultured Cells --
45 chr6:106969000-106974400 Flanking Active TSS Primary B cells from cord blood blood
46 chr6:106969200-106970400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr6:106969200-106970400 Strong transcription HMEC breast
48 chr6:106969200-106971000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr6:106969200-106972000 Flanking Active TSS Primary T cells from cord blood blood
50 chr6:106969200-106972800 Weak transcription Fetal Intestine Large intestine

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