Variant report

Variant	rs17500660
Chromosome Location	chr7:27163119-27163120
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPD	chr7:27162803-27163129	HepG2	liver:	n/a	chr7:27162986-27162995
2	CHD1	chr7:27152421-27165798	IMR90	lung:	n/a	n/a
3	CEBPB	chr7:27162759-27163232	A549	lung:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
4	CEBPB	chr7:27162445-27163181	A549	lung:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
5	POLR2A	chr7:27162550-27163187	HepG2	liver:	n/a	n/a
6	SUZ12	chr7:27161567-27165692	H1-hESC	embryonic stem cell:	n/a	n/a
7	CEBPB	chr7:27162798-27163209	H1-hESC	embryonic stem cell:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
8	POLR2A	chr7:27160289-27163758	HepG2	liver:	n/a	n/a
9	CEBPB	chr7:27162530-27163239	IMR90	lung:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
10	CEBPB	chr7:27162624-27163348	A549	lung:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
11	CEBPB	chr7:27162772-27163217	HepG2	liver:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
12	CEBPB	chr7:27162748-27163225	HepG2	liver:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
13	SUZ12	chr7:27161578-27165047	NT2-D1	testis:	n/a	n/a
14	CHD2	chr7:27162879-27163123	HepG2	liver:	n/a	n/a
15	POLR2A	chr7:27160061-27164901	IMR90	lung:	n/a	n/a
16	CEBPB	chr7:27162827-27163153	MCF-7	breast:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995
17	HEY1	chr7:27162500-27163149	HepG2	liver:	n/a	n/a
18	CEBPB	chr7:27162791-27163247	HepG2	liver:	n/a	chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995 chr7:27162986-27162995

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:27163095-27163145	NH-A	brain:	n/a
2	chr7:27163095-27163145	ECC-1	luminal epithelium:	n/a
3	chr7:27163095-27163145	AoSMC	blood vessel:	n/a
4	chr7:27163095-27163145	A549	lung:	n/a
5	chr7:27163095-27163145	K562	blood:	n/a
6	chr7:27163095-27163145	AG04449	skin:	fetal
7	chr7:27163095-27163145	PANC-1	pancreas:	n/a
8	chr7:27163095-27163145	PFSK-1	brain:	n/a
9	chr7:27163095-27163145	NHDF-neo	bronchial:	n/a
10	chr7:27163095-27163145	BE2_C	brain:	n/a
11	chr7:27163095-27163145	T-47D	breast:	n/a
12	chr7:27163095-27163145	HPAEpiC	pulmonary alveolar:	n/a
13	chr7:27163095-27163145	GM12891	blood:	n/a
14	chr7:27163095-27163145	CMK	blood:	n/a
15	chr7:27163095-27163145	GM12878	blood:	n/a
16	chr7:27163095-27163145	Caco-2	colon:	n/a
17	chr7:27163095-27163145	SK-N-SH	brain:	n/a
18	chr7:27163095-27163145	GM06990	blood:	n/a
19	chr7:27163095-27163145	GM19239	blood:	n/a
20	chr7:27163095-27163145	NHBE	bronchial:	n/a
21	chr7:27163095-27163145	U87	brain:	n/a
22	chr7:27163095-27163145	HRE	kidney:	n/a
23	chr7:27163095-27163145	SK-N-SH_RA	brain:	n/a
24	chr7:27163095-27163145	NT2-D1	testis:	n/a
25	chr7:27163095-27163145	MCF-7	breast:	n/a
26	chr7:27163095-27163145	IMR90	lung:	fetal
27	chr7:27163095-27163145	HRCEpiC	kidney:	n/a
28	chr7:27163095-27163145	AG09309	skin:	n/a
29	chr7:27163095-27163145	SAEC	small airway:	n/a
30	chr7:27163095-27163145	HepG2	liver:	n/a
31	chr7:27163095-27163145	PrEC	prostate:	n/a
32	chr7:27163095-27163145	HEK293	kidney:	embryo
33	chr7:27163095-27163145	RPTEC	kidney:	n/a
34	chr7:27163095-27163145	ovcar-3	ovarian:	n/a
35	chr7:27163095-27163145	HCT-116	colon:	n/a
36	chr7:27163095-27163145	Hela-S3	cervix:	n/a
37	chr7:27163095-27163145	HL-60	blood:	n/a
38	chr7:27163095-27163145	AG04450	lung:	fetal
39	chr7:27163095-27163145	HRPEpiC	eye:	n/a
40	chr7:27163095-27163145	BJ	skin:	n/a
41	chr7:27163095-27163145	HCM	heart:	n/a
42	chr7:27163095-27163145	HNPCEpiC	eye:	n/a
43	chr7:27163095-27163145	NB4	blood:	n/a
44	chr7:27163095-27163145	SK-N-MC	brain:	n/a
45	chr7:27163095-27163145	HCF	heart:	n/a
46	chr7:27163095-27163145	Hepatocyte	liver:	n/a
47	chr7:27163095-27163145	SKMC	muscle:	n/a
48	chr7:27163095-27163145	HIPEpiC	eye:	n/a
49	chr7:27163095-27163145	Jurkat	blood:	n/a
50	chr7:27163095-27163145	HCPEpiC	choroid plexus:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	7:27162022-27164727..7:27207968-27210222	H1-hESC	embryonic stem cell:	embryo
2	7:27162022-27164727..7:27181770-27195105	H1-hESC	embryonic stem cell:	embryo
3	7:27137201-27143270..7:27162022-27164727	H1-hESC	embryonic stem cell:	embryo
4	7:27162022-27164727..7:27176959-27181770	H1-hESC	embryonic stem cell:	embryo
5	7:27162022-27164727..7:27216170-27221403	H1-hESC	embryonic stem cell:	embryo
6	7:27162022-27164727..7:27238414-27242313	H1-hESC	embryonic stem cell:	embryo
7	7:27162022-27164727..7:27165488-27167947	H1-hESC	embryonic stem cell:	embryo
8	7:27162022-27164727..7:27203007-27207968	H1-hESC	embryonic stem cell:	embryo
9	chr7:27161653..27164579-chr7:27169154..27171048,2	MCF-7	breast:
10	7:27143270-27156413..7:27162022-27164727	H1-hESC	embryonic stem cell:	embryo
11	7:27130634-27137201..7:27162022-27164727	H1-hESC	embryonic stem cell:	embryo

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EVX1-10	chr7:27163079-27163257	ENSG00000253552
2	lnc-EVX1-10	chr7:27163079-27163257	ENSG00000253552
3	lnc-EVX1-10	chr7:27163079-27163437	ENSG00000253552
4	lnc-EVX1-10	chr7:27163079-27164229	ENSG00000253552
5	lnc-EVX1-10	chr7:27163079-27163257	ENSG00000253552

Variant related genes	Relation type
HOXA3	TF binding region
HOXA3	CpG island
ENSG00000106031	Chromatin interaction
ENSG00000106006	Chromatin interaction
ENSG00000207584	Chromatin interaction
ENSG00000197576	Chromatin interaction
ENSG00000105997	Chromatin interaction
ENSG00000253552	Chromatin interaction
ENSG00000253187	Chromatin interaction
ENSG00000254369	Chromatin interaction
ENSG00000257184	Chromatin interaction
ENSG00000105991	Chromatin interaction
ENSG00000243766	Chromatin interaction
ENSG00000106004	Chromatin interaction
ENSG00000253293	Chromatin interaction
ENSG00000233429	Chromatin interaction
ENSG00000105996	Chromatin interaction
ENSG00000273433	Chromatin interaction
ENSG00000272801	Chromatin interaction
ENSG00000078399	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs17472098	1.00[AMR][1000 genomes]
rs17472357	1.00[AMR][1000 genomes]
rs17472658	1.00[AMR][1000 genomes]
rs17473046	1.00[AMR][1000 genomes]
rs17473088	1.00[AMR][1000 genomes]
rs17473102	1.00[AMR][1000 genomes]
rs17501766	1.00[AMR][1000 genomes]
rs17501850	1.00[AMR][1000 genomes]
rs17501857	1.00[AMR][1000 genomes]
rs17501864	1.00[AMR][1000 genomes]
rs17501898	1.00[AMR][1000 genomes]
rs17501954	1.00[AMR][1000 genomes]
rs17501996	1.00[AMR][1000 genomes]
rs57330666	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:37 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
2	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
3	nsv1018709	chr7:26990384-27216552	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
4	nsv538806	chr7:26990384-27216552	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
5	nsv887856	chr7:27073731-27297791	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
6	nsv824038	chr7:27119294-27284522	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
7	nsv887857	chr7:27120689-27229549	Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
8	nsv824039	chr7:27121825-27294951	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
9	nsv824040	chr7:27121870-27295010	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
10	nsv887858	chr7:27127231-27188659	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
11	nsv887860	chr7:27127231-27196069	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
12	nsv887859	chr7:27127231-27196113	Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
13	nsv887861	chr7:27127231-27206688	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
14	nsv887862	chr7:27127231-27217359	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
15	nsv887863	chr7:27127231-27243106	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
16	nsv887864	chr7:27127231-27243962	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
17	nsv887865	chr7:27127231-27247279	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
18	nsv887866	chr7:27127231-27248373	Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
19	nsv887867	chr7:27127231-27252246	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
20	nsv824041	chr7:27128039-27294951	Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
21	nsv606463	chr7:27135314-27182245	Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
22	nsv887868	chr7:27135314-27202289	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
23	nsv887869	chr7:27135314-27297791	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
24	nsv887871	chr7:27136308-27179814	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
25	nsv887872	chr7:27136308-27181437	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
26	nsv887873	chr7:27136308-27186495	Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
27	nsv887874	chr7:27136308-27196069	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
28	nsv606464	chr7:27138478-27168590	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
29	nsv1020608	chr7:27139892-27324004	Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
30	nsv538807	chr7:27139892-27324004	Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
31	nsv1033316	chr7:27140645-27237951	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
32	nsv606465	chr7:27143757-27229549	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	174 gene(s)	inside rSNPs	diseases
33	nsv606466	chr7:27145024-27197319	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
34	nsv606467	chr7:27145100-27196113	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
35	nsv887875	chr7:27145100-27243962	Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
36	nsv532118	chr7:27146920-27354205	Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
37	nsv5674	chr7:27152562-27197341	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:65 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27146400-27169600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr7:27152800-27169400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr7:27155200-27163600	Weak transcription	NHDF-Ad	bronchial
4	chr7:27155600-27169400	Weak transcription	Hela-S3	cervix
5	chr7:27156200-27169200	Weak transcription	Osteobl	bone
6	chr7:27159400-27163400	Weak transcription	Spleen	Spleen
7	chr7:27160200-27163200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr7:27160200-27163800	Flanking Active TSS	HUVEC	blood vessel
9	chr7:27160400-27164400	Transcr. at gene 5' and 3'	Fetal Stomach	stomach
10	chr7:27160800-27163200	Active TSS	Rectal Smooth Muscle	rectum
11	chr7:27161000-27164200	Flanking Active TSS	HMEC	breast
12	chr7:27161000-27165200	Weak transcription	Psoas Muscle	Psoas
13	chr7:27161200-27164000	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr7:27161200-27165400	Weak transcription	Skeletal Muscle Female	skeletal muscle
15	chr7:27161200-27165600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr7:27161200-27166600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr7:27161400-27163400	Active TSS	A549	lung
18	chr7:27161400-27164000	Active TSS	Fetal Kidney	kidney
19	chr7:27161400-27164600	Active TSS	Duodenum Smooth Muscle	Duodenum
20	chr7:27161600-27163200	Active TSS	Fetal Thymus	thymus
21	chr7:27161600-27163200	Bivalent/Poised TSS	HepG2	liver
22	chr7:27161600-27163600	Flanking Bivalent TSS/Enh	Fetal Lung	lung
23	chr7:27161600-27164000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
24	chr7:27161600-27164200	Active TSS	Esophagus	oesophagus
25	chr7:27161600-27164400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr7:27161600-27164600	Transcr. at gene 5' and 3'	Fetal Intestine Small	intestine
27	chr7:27161600-27166200	Genic enhancers	Fetal Muscle Leg	muscle
28	chr7:27161800-27164000	Weak transcription	Small Intestine	intestine
29	chr7:27161800-27164400	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
30	chr7:27161800-27164600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr7:27161800-27164800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
32	chr7:27162000-27163400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
33	chr7:27162000-27163600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr7:27162000-27163800	Flanking Active TSS	NHLF	lung
35	chr7:27162000-27164200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr7:27162200-27164200	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr7:27162200-27164200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr7:27162200-27169000	Weak transcription	NHEK	skin
39	chr7:27162400-27163400	Weak transcription	Colon Smooth Muscle	Colon
40	chr7:27162400-27163400	Active TSS	Rectal Mucosa Donor 29	rectum
41	chr7:27162400-27163800	Weak transcription	Pancreas	Pancrea
42	chr7:27162400-27164200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr7:27162400-27165200	Weak transcription	Right Atrium	heart
44	chr7:27162400-27165800	Weak transcription	Primary hematopoietic stem cells	blood
45	chr7:27162600-27169000	Weak transcription	Muscle Satellite Cultured Cells	--
46	chr7:27162600-27169000	Weak transcription	Aorta	Aorta
47	chr7:27162800-27163200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
48	chr7:27162800-27163200	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
49	chr7:27162800-27163200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr7:27162800-27163200	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland

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