Variant report

Variant rs17500785
Chromosome Location chr7:27173380-27173381
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27171200-27174000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr7:27171200-27175400 Enhancers NHLF lung
3 chr7:27171200-27175600 Enhancers Fetal Stomach stomach
4 chr7:27171200-27175800 Enhancers Fetal Intestine Large intestine
5 chr7:27171200-27176400 Weak transcription Lung lung
6 chr7:27171200-27181400 Weak transcription Esophagus oesophagus
7 chr7:27171400-27173400 Weak transcription Muscle Satellite Cultured Cells --
8 chr7:27171400-27173400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr7:27171400-27173400 Weak transcription HSMM muscle
10 chr7:27171400-27174800 Enhancers Rectal Smooth Muscle rectum
11 chr7:27171400-27175200 Enhancers A549 lung
12 chr7:27171400-27175400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr7:27171400-27175800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr7:27171400-27175800 Weak transcription HSMMtube muscle
15 chr7:27171600-27173400 Weak transcription Osteobl bone
16 chr7:27171600-27173600 Weak transcription Primary hematopoietic stem cells blood
17 chr7:27171600-27173600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr7:27171600-27173800 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr7:27171600-27173800 Weak transcription NHDF-Ad bronchial
20 chr7:27172000-27173800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr7:27172600-27174400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr7:27172600-27174400 Flanking Active TSS Fetal Kidney kidney
23 chr7:27172600-27178400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr7:27173000-27173400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
25 chr7:27173000-27173600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr7:27173000-27173600 Flanking Active TSS HepG2 liver
27 chr7:27173000-27173800 Enhancers Colonic Mucosa Colon
28 chr7:27173000-27173800 Flanking Active TSS Colon Smooth Muscle Colon
29 chr7:27173000-27173800 Flanking Bivalent TSS/Enh Fetal Lung lung
30 chr7:27173000-27173800 Enhancers Psoas Muscle Psoas
31 chr7:27173000-27174000 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr7:27173000-27174000 Flanking Active TSS Stomach Smooth Muscle stomach
33 chr7:27173000-27174400 Enhancers Skeletal Muscle Female skeletal muscle
34 chr7:27173000-27174400 Flanking Active TSS HUVEC blood vessel
35 chr7:27173000-27174800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr7:27173000-27174800 Enhancers Skeletal Muscle Male skeletal muscle
37 chr7:27173000-27174800 Enhancers Stomach Mucosa stomach
38 chr7:27173000-27175600 Enhancers Duodenum Smooth Muscle Duodenum
39 chr7:27173000-27175800 Genic enhancers Fetal Muscle Leg muscle
40 chr7:27173000-27176400 Enhancers Adipose Nuclei Adipose
41 chr7:27173000-27176800 Enhancers NHEK skin
42 chr7:27173200-27173400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
43 chr7:27173200-27173400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
44 chr7:27173200-27173800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr7:27173200-27173800 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr7:27173200-27173800 Bivalent Enhancer Fetal Intestine Small intestine
47 chr7:27173200-27174400 Bivalent Enhancer Duodenum Mucosa Duodenum
48 chr7:27173200-27175200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr7:27173200-27175600 Enhancers HMEC breast

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