Variant report

Variant	rs17512644
Chromosome Location	chr12:118797768-118797769
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr12:118796652-118797811	HL-60	blood:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:118795944..118799029-chr12:118813367..118816891,5	K562	blood:
2	chr12:118789693..118801109-chr12:118805205..118813455,21	K562	blood:
3	chr12:118792933..118800473-chr12:118805927..118813309,24	K562	blood:
4	chr12:118791019..118798938-chr12:118809011..118813946,9	MCF-7	breast:
5	chr12:118796352..118799029-chr12:118814094..118816699,2	K562	blood:

No data

Variant related genes	Relation type
TAOK3	TF binding region
ENSG00000270482	Chromatin interaction
ENSG00000135090	Chromatin interaction
ENSG00000111707	Chromatin interaction

Extended variants
information (count: 187 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:183)

rs_ID	r²[population]
rs10082823	0.81[EUR][1000 genomes]
rs10507286	0.85[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap]
rs1060964	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[EUR][1000 genomes]
rs10850967	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs11068891	0.93[CEU][hapmap]
rs11068908	0.93[CEU][hapmap]
rs11068917	0.93[CEU][hapmap];0.90[TSI][hapmap];0.87[EUR][1000 genomes]
rs11068919	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs11068926	0.88[EUR][1000 genomes]
rs12229607	0.93[CEU][hapmap]
rs12820035	1.00[CHB][hapmap]
rs16948193	0.92[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs16948197	0.93[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap];0.81[EUR][1000 genomes]
rs16948204	0.93[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap]
rs16948230	0.86[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap];0.81[EUR][1000 genomes]
rs16948234	0.93[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap];0.82[EUR][1000 genomes]
rs16948250	1.00[CEU][hapmap]
rs17433217	0.81[EUR][1000 genomes]
rs17440336	0.85[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap]
rs17440364	0.85[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.86[TSI][hapmap]
rs17440433	1.00[ASW][hapmap];0.85[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs17440669	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs17440774	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs17440823	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17440893	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17440942	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17440956	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17441033	0.92[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17441047	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17441061	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17441075	0.92[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17441172	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17441214	0.84[AMR][1000 genomes]
rs17441251	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17512142	1.00[ASW][hapmap];0.85[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap]
rs17512177	0.83[CEU][hapmap];1.00[CHB][hapmap]
rs17512198	0.85[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap]
rs17512219	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs17512407	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs17512483	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs17512525	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs17512574	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17512609	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs17512652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17512763	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17513006	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17513013	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs17586342	0.85[CEU][hapmap]
rs17619932	0.93[CEU][hapmap];0.87[TSI][hapmap];0.87[EUR][1000 genomes]
rs1909617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2036314	0.87[EUR][1000 genomes]
rs2036489	0.83[EUR][1000 genomes]
rs2055534	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2062519	1.00[CEU][hapmap];0.82[TSI][hapmap];0.83[EUR][1000 genomes]
rs2280711	0.85[CEU][hapmap]
rs2393403	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2393415	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs2393416	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs2784	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs2893771	0.80[AMR][1000 genomes]
rs3852531	0.91[AFR][1000 genomes]
rs3852532	0.81[EUR][1000 genomes]
rs4406856	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4442583	0.88[EUR][1000 genomes]
rs4457791	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4766899	1.00[CEU][hapmap];0.82[TSI][hapmap];0.83[EUR][1000 genomes]
rs4766900	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4767669	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4767670	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4767671	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4767672	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs507517	1.00[CHB][hapmap]
rs55659011	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs55833534	0.82[EUR][1000 genomes]
rs55842338	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs55929628	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56033674	0.81[EUR][1000 genomes]
rs56133316	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56157623	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56275187	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs56284927	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56324376	0.83[EUR][1000 genomes]
rs56347775	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs56708462	0.82[EUR][1000 genomes]
rs58113338	0.81[EUR][1000 genomes]
rs59594854	0.83[EUR][1000 genomes]
rs61943362	0.91[AFR][1000 genomes]
rs61943364	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs61943367	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943368	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943369	0.87[EUR][1000 genomes]
rs61943370	0.88[EUR][1000 genomes]
rs61943371	0.88[EUR][1000 genomes]
rs61943385	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943388	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943389	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943391	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943392	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943393	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943397	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943399	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943400	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943401	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943402	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943403	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943404	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61943405	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61943406	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61943443	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs61943444	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61943447	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs61943451	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs61943452	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs61943454	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs61943455	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs61943456	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs61943457	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs61945182	0.81[EUR][1000 genomes]
rs61945183	0.81[EUR][1000 genomes]
rs61945184	0.81[EUR][1000 genomes]
rs61945187	0.81[EUR][1000 genomes]
rs61945188	0.81[EUR][1000 genomes]
rs61945189	0.91[AFR][1000 genomes]
rs61945192	1.00[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs61945206	0.81[EUR][1000 genomes]
rs61945212	1.00[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs61945216	0.81[EUR][1000 genomes]
rs61945217	0.91[AFR][1000 genomes]
rs61945220	1.00[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs61945221	1.00[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs61945223	0.91[AFR][1000 genomes]
rs61945224	0.91[AFR][1000 genomes]
rs61945225	0.91[AFR][1000 genomes]
rs61945226	0.81[EUR][1000 genomes]
rs61945228	0.82[EUR][1000 genomes]
rs61946067	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs61946068	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs6490173	0.92[CEU][hapmap]
rs6490177	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs673078	1.00[ASW][hapmap];1.00[CHB][hapmap];0.86[GIH][hapmap];0.84[MKK][hapmap];0.87[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs7132753	0.91[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs7136216	0.85[CEU][hapmap]
rs7136676	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7137055	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7137184	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7294498	1.00[CEU][hapmap]
rs7295288	1.00[CEU][hapmap];1.00[CHB][hapmap];0.83[EUR][1000 genomes]
rs7299040	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7302387	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs7303417	0.92[CEU][hapmap];0.81[EUR][1000 genomes]
rs7304342	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7305647	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7307393	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs7309484	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7309671	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs7312555	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];0.84[AMR][1000 genomes]
rs7314987	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs7315458	0.80[EUR][1000 genomes]
rs73205512	0.81[EUR][1000 genomes]
rs73205526	0.81[EUR][1000 genomes]
rs73205531	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs73205576	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73205579	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73205594	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73207504	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73207564	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73207566	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs7958551	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs7958652	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs7960802	0.91[AFR][1000 genomes]
rs7961312	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs7962185	0.93[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs7963353	0.81[EUR][1000 genomes]
rs7965350	0.93[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs7967900	1.00[ASW][hapmap];0.93[CEU][hapmap];1.00[CHB][hapmap];0.85[MEX][hapmap];0.82[MKK][hapmap];0.96[TSI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7968011	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7970481	0.81[EUR][1000 genomes]
rs882927	0.87[EUR][1000 genomes]
rs884844	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs950288	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs965524	1.00[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9669004	0.81[EUR][1000 genomes]
rs9943819	0.93[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1053785	chr12:118490955-118874194	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv1040061	chr12:118648415-118800437	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv1053417	chr12:118688969-118808530	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv899547	chr12:118791441-118896304	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs17512644	SUDS3	cis	parietal	SCAN
rs17512644	SUDS3	Cis_1M	lymphoblastoid	RTeQTL
rs17512644	SUDS3	cis	cerebellum	SCAN

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118793000-118799200	Enhancers	Osteobl	bone
2	chr12:118793200-118797800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr12:118793400-118799200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr12:118793600-118797800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
5	chr12:118793800-118799200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr12:118794400-118797800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr12:118794600-118797800	Active TSS	GM12878-XiMat	blood
8	chr12:118794800-118807800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr12:118794800-118808400	Weak transcription	Small Intestine	intestine
10	chr12:118794800-118809000	Weak transcription	Lung	lung
11	chr12:118794800-118809000	Weak transcription	Pancreas	Pancrea
12	chr12:118794800-118809200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr12:118794800-118809200	Weak transcription	Esophagus	oesophagus
14	chr12:118795400-118797800	Enhancers	NHLF	lung
15	chr12:118795600-118798400	Weak transcription	Hela-S3	cervix
16	chr12:118795600-118798600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr12:118795600-118798800	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr12:118795600-118799200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr12:118795600-118799200	Enhancers	NHDF-Ad	bronchial
20	chr12:118795600-118801400	Weak transcription	Left Ventricle	heart
21	chr12:118795600-118808600	Weak transcription	Sigmoid Colon	Sigmoid Colon
22	chr12:118795800-118798400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr12:118796000-118798400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr12:118796000-118801400	Weak transcription	Brain Cingulate Gyrus	brain
25	chr12:118796200-118808200	Weak transcription	Brain Substantia Nigra	brain
26	chr12:118796400-118798600	Weak transcription	Brain Angular Gyrus	brain
27	chr12:118796400-118799200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr12:118796600-118798600	Weak transcription	HSMM	muscle
29	chr12:118797000-118798400	Weak transcription	Muscle Satellite Cultured Cells	--
30	chr12:118797000-118807200	Weak transcription	Brain Hippocampus Middle	brain
31	chr12:118797200-118797800	Flanking Active TSS	Primary T cells from cord blood	blood
32	chr12:118797200-118797800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
33	chr12:118797200-118797800	Flanking Active TSS	Dnd41	blood
34	chr12:118797200-118798600	Weak transcription	HUES48 Cell Line	embryonic stem cell
35	chr12:118797200-118798800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
36	chr12:118797200-118798800	Enhancers	NHEK	skin
37	chr12:118797200-118808000	Weak transcription	Liver	Liver
38	chr12:118797200-118808000	Weak transcription	Fetal Lung	lung
39	chr12:118797200-118808400	Weak transcription	Fetal Stomach	stomach
40	chr12:118797400-118797800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
41	chr12:118797400-118797800	Enhancers	Gastric	stomach
42	chr12:118797400-118797800	Enhancers	Stomach Mucosa	stomach
43	chr12:118797400-118798000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
44	chr12:118797400-118798400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr12:118797400-118798400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr12:118797400-118798400	Enhancers	HUVEC	blood vessel
47	chr12:118797400-118798600	Weak transcription	HUES64 Cell Line	embryonic stem cell
48	chr12:118797400-118803400	Enhancers	Primary monocytes fromperipheralblood	blood
49	chr12:118797400-118808200	Weak transcription	Rectal Smooth Muscle	rectum
50	chr12:118797400-118808400	Weak transcription	Fetal Intestine Large	intestine

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