Variant report

Variant rs17563929
Chromosome Location chr18:427306-427307
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:393200-433000 Weak transcription Fetal Brain Male brain
2 chr18:421400-434400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr18:421800-429200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr18:422000-432800 Weak transcription Brain Substantia Nigra brain
5 chr18:422000-434400 Weak transcription Brain Cingulate Gyrus brain
6 chr18:423600-427600 Enhancers Osteobl bone
7 chr18:424400-427400 Enhancers Fetal Kidney kidney
8 chr18:424600-448200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr18:425000-427600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr18:425000-429600 Weak transcription Pancreas Pancrea
11 chr18:425000-433000 Weak transcription Fetal Lung lung
12 chr18:425400-428000 Weak transcription Lung lung
13 chr18:425400-437600 Weak transcription Right Atrium heart
14 chr18:425600-427600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr18:425600-432800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr18:425600-436800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr18:425800-433400 Weak transcription Placenta Placenta
18 chr18:426200-427400 Enhancers NH-A brain
19 chr18:426600-427600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr18:426800-427400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr18:426800-427400 Enhancers Brain Angular Gyrus brain
22 chr18:426800-427400 Enhancers HSMMtube muscle
23 chr18:426800-427600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr18:426800-427600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
25 chr18:427000-427400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr18:427000-427400 Enhancers Brain Anterior Caudate brain
27 chr18:427000-427400 Enhancers Brain Inferior Temporal Lobe brain
28 chr18:427000-427400 Enhancers Esophagus oesophagus
29 chr18:427000-427400 Strong transcription Fetal Stomach stomach
30 chr18:427000-428600 Enhancers NHDF-Ad bronchial
31 chr18:427000-429000 Enhancers Brain Hippocampus Middle brain
32 chr18:427200-427400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr18:427200-427400 Enhancers Fetal Muscle Trunk muscle
34 chr18:427200-427600 Enhancers Rectal Smooth Muscle rectum
35 chr18:427200-435400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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