Variant report

Variant	rs17577103
Chromosome Location	chr12:62233811-62233812
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11174176	0.90[YRI][hapmap]
rs11609198	0.91[YRI][hapmap]
rs11613304	0.90[YRI][hapmap]
rs12809729	1.00[YRI][hapmap]
rs12826571	0.80[YRI][hapmap]
rs12827424	0.83[LWK][hapmap];1.00[YRI][hapmap]
rs2219259	0.83[LWK][hapmap];0.81[MKK][hapmap];1.00[YRI][hapmap]
rs2359982	1.00[YRI][hapmap]
rs2884859	1.00[YRI][hapmap]
rs4482081	0.90[YRI][hapmap]
rs717271	0.81[YRI][hapmap]
rs724986	0.89[YRI][hapmap]
rs7484594	0.91[YRI][hapmap]
rs7484947	0.90[YRI][hapmap]
rs7968946	0.82[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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