Variant report

Variant	rs17598923
Chromosome Location	chr10:44705747-44705748
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs3912305	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44703000-44705800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44704400-44705800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr10:44704600-44705800	Enhancers	Fetal Heart	heart
4	chr10:44704600-44706000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr10:44705000-44705800	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:44705200-44705800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr10:44705400-44705800	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr10:44705400-44706200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr10:44705600-44706800	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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