Variant report

Variant	rs17599416
Chromosome Location	chr4:46973438-46973439
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1028006	0.90[CHB][hapmap];0.89[EUR][1000 genomes]
rs10938462	0.83[CEU][hapmap];0.85[CHB][hapmap]
rs17599165	0.89[EUR][1000 genomes]
rs17599367	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17641603	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2882600	0.89[EUR][1000 genomes]
rs35561607	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3920214	0.90[CHB][hapmap]
rs55929667	0.89[EUR][1000 genomes]
rs62303698	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62303702	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73245901	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73247606	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73247608	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs956378	0.89[CHB][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46959000-46977200	Weak transcription	Brain Anterior Caudate	brain
2	chr4:46973200-46976400	Weak transcription	Brain Germinal Matrix	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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