Variant report

Variant rs17602145
Chromosome Location chr5:15693084-15693085
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:15684000-15695200 Weak transcription HUVEC blood vessel
2 chr5:15684600-15694000 Weak transcription Fetal Kidney kidney
3 chr5:15686600-15694400 Weak transcription Fetal Lung lung
4 chr5:15687800-15694200 Weak transcription H1 Cell Line embryonic stem cell
5 chr5:15687800-15694200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr5:15688000-15694200 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr5:15688400-15704200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:15690200-15695000 Enhancers NHDF-Ad bronchial
9 chr5:15690800-15693200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr5:15690800-15695800 Enhancers Brain Anterior Caudate brain
11 chr5:15690800-15696200 Enhancers Ovary ovary
12 chr5:15690800-15696400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
13 chr5:15691000-15694600 Weak transcription NH-A brain
14 chr5:15691400-15694200 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr5:15691400-15694400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr5:15691400-15695200 Weak transcription Aorta Aorta
17 chr5:15691600-15693400 Weak transcription Fetal Stomach stomach
18 chr5:15691600-15693600 Weak transcription Brain Inferior Temporal Lobe brain
19 chr5:15691600-15694000 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr5:15691600-15694000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr5:15691600-15694200 Weak transcription H9 Cell Line embryonic stem cell
22 chr5:15691600-15694200 Weak transcription Placenta Amnion Placenta Amnion
23 chr5:15691800-15693200 Weak transcription Brain Substantia Nigra brain
24 chr5:15691800-15693800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr5:15691800-15694200 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr5:15691800-15694200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr5:15691800-15694200 Weak transcription Adipose Nuclei Adipose
28 chr5:15691800-15694800 Weak transcription HSMM muscle
29 chr5:15691800-15695000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr5:15692000-15694400 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr5:15692000-15694600 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr5:15692000-15694600 Weak transcription Osteobl bone
33 chr5:15692200-15693200 Weak transcription Left Ventricle heart
34 chr5:15692200-15693400 Weak transcription Spleen Spleen
35 chr5:15692200-15693600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr5:15692200-15694000 Weak transcription Brain Angular Gyrus brain
37 chr5:15692200-15694200 Weak transcription Brain Cingulate Gyrus brain
38 chr5:15692200-15694200 Weak transcription HSMMtube muscle
39 chr5:15692200-15694600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr5:15692400-15694200 Weak transcription Esophagus oesophagus
41 chr5:15692400-15694400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr5:15692600-15693400 Weak transcription Colon Smooth Muscle Colon
43 chr5:15692600-15695400 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr5:15692600-15695800 Enhancers Brain Hippocampus Middle brain
45 chr5:15692600-15696200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr5:15692800-15693200 Genic enhancers Fetal Heart heart
47 chr5:15692800-15694600 Enhancers Right Ventricle heart
48 chr5:15692800-15696000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr5:15693000-15693200 ZNF genes & repeats Lung lung
50 chr5:15693000-15693400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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