The 2.0 version of rSNPBase

Variant report

Variant rs17645134
Chromosome Location chr4:53875774-53875775
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:53863400-53877800 Weak transcription Gastric stomach
2 chr4:53863400-53878000 Weak transcription NH-A brain
3 chr4:53863400-53878200 Weak transcription Fetal Intestine Small intestine
4 chr4:53863800-53876600 Weak transcription Muscle Satellite Cultured Cells --
5 chr4:53864000-53877800 Weak transcription NHDF-Ad bronchial
6 chr4:53864200-53875800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr4:53864400-53877000 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr4:53864400-53877600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr4:53864600-53876000 Weak transcription Fetal Muscle Leg muscle
10 chr4:53864600-53876600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr4:53865000-53876000 Weak transcription Right Atrium heart
12 chr4:53865600-53876800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr4:53870600-53878200 Weak transcription HSMM muscle
14 chr4:53870800-53877600 Weak transcription Osteobl bone
15 chr4:53870800-53877800 Weak transcription HSMMtube muscle
16 chr4:53870800-53880200 Weak transcription Esophagus oesophagus
17 chr4:53871000-53876400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr4:53871800-53876200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr4:53872400-53876000 Weak transcription Liver Liver
20 chr4:53873000-53876000 Weak transcription Right Ventricle heart
21 chr4:53873000-53876400 Weak transcription Fetal Heart heart
22 chr4:53873200-53877800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr4:53873200-53877800 Weak transcription Psoas Muscle Psoas
24 chr4:53873200-53877800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr4:53873200-53880200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr4:53873400-53875800 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr4:53873400-53875800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr4:53873400-53876000 Weak transcription Pancreas Pancrea
29 chr4:53873400-53876600 Weak transcription Lung lung
30 chr4:53873400-53886800 Weak transcription Left Ventricle heart
31 chr4:53873600-53876000 Weak transcription Fetal Thymus thymus
32 chr4:53873800-53877600 Weak transcription Dnd41 blood
33 chr4:53874000-53877200 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr4:53874000-53879800 Enhancers Fetal Lung lung
35 chr4:53874000-53882200 Enhancers Fetal Kidney kidney
36 chr4:53874200-53879200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr4:53874400-53876800 Weak transcription Primary hematopoietic stem cells blood
38 chr4:53874600-53875800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr4:53874600-53875800 Weak transcription Ovary ovary
40 chr4:53874600-53885000 Weak transcription Spleen Spleen
41 chr4:53874800-53876000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr4:53875400-53877400 Enhancers Primary T cells from cord blood blood
43 chr4:53875600-53881400 Weak transcription HepG2 liver

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Last update: Aug 31, 2015