Variant report
| Variant | rs17653989 |
|---|---|
| Chromosome Location | chr21:28297239-28297240 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr21:28289600-28298000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr21:28291000-28297600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 3 | chr21:28291000-28297800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr21:28291000-28311800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 5 | chr21:28291200-28297400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 6 | chr21:28291400-28297600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 7 | chr21:28291400-28299400 | Weak transcription | NHLF | lung |
| 8 | chr21:28291600-28312200 | Strong transcription | HSMM | muscle |
| 9 | chr21:28292800-28298400 | Weak transcription | Pancreas | Pancrea |
| 10 | chr21:28293000-28298000 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 11 | chr21:28293000-28334800 | Weak transcription | Hela-S3 | cervix |
| 12 | chr21:28293200-28297400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 13 | chr21:28293800-28298200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 14 | chr21:28293800-28303600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 15 | chr21:28294600-28305800 | Weak transcription | Small Intestine | intestine |
| 16 | chr21:28294600-28318000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 17 | chr21:28294600-28318200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 18 | chr21:28294800-28298000 | Weak transcription | Placenta | Placenta |
| 19 | chr21:28294800-28307200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 20 | chr21:28295000-28303600 | Weak transcription | Fetal Intestine Small | intestine |
| 21 | chr21:28295200-28306600 | Strong transcription | Osteobl | bone |
| 22 | chr21:28295200-28310000 | Strong transcription | Adipose Nuclei | Adipose |
| 23 | chr21:28295400-28297800 | Weak transcription | Fetal Brain Female | brain |
| 24 | chr21:28295400-28297800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 25 | chr21:28295400-28300400 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 26 | chr21:28295400-28318200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 27 | chr21:28295600-28300600 | Strong transcription | Fetal Muscle Trunk | muscle |
| 28 | chr21:28295800-28298000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 29 | chr21:28295800-28300400 | Strong transcription | Fetal Muscle Leg | muscle |
| 30 | chr21:28296000-28298000 | Strong transcription | Ovary | ovary |
| 31 | chr21:28296200-28307800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 32 | chr21:28296600-28300400 | Strong transcription | HSMMtube | muscle |
| 33 | chr21:28296600-28302200 | Weak transcription | Esophagus | oesophagus |
| 34 | chr21:28296600-28315400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr21:28296800-28298400 | Weak transcription | Fetal Stomach | stomach |
| 36 | chr21:28296800-28304000 | Weak transcription | Fetal Intestine Large | intestine |
| 37 | chr21:28296800-28304200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 38 | chr21:28296800-28305000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 39 | chr21:28296800-28307400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 40 | chr21:28296800-28308200 | Weak transcription | Fetal Lung | lung |
| 41 | chr21:28296800-28318200 | Weak transcription | Left Ventricle | heart |
| 42 | chr21:28297000-28297800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr21:28297000-28299200 | Weak transcription | Fetal Kidney | kidney |
| 44 | chr21:28297000-28299400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 45 | chr21:28297000-28299400 | Weak transcription | NHDF-Ad | bronchial |
| 46 | chr21:28297000-28299600 | Weak transcription | Spleen | Spleen |
| 47 | chr21:28297000-28311800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 48 | chr21:28297200-28298600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 49 | chr21:28297200-28298600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 50 | chr21:28297200-28298600 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
