Variant report
| Variant | rs17670745 |
|---|---|
| Chromosome Location | chr15:40643734-40643735 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:40633600-40644800 | Weak transcription | Brain Germinal Matrix | brain |
| 2 | chr15:40633600-40645600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 3 | chr15:40636400-40650000 | Weak transcription | Right Atrium | heart |
| 4 | chr15:40636800-40646200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 5 | chr15:40637200-40644800 | Weak transcription | Fetal Brain Female | brain |
| 6 | chr15:40637200-40645600 | Weak transcription | Brain Angular Gyrus | brain |
| 7 | chr15:40637400-40644800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr15:40637400-40645400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 9 | chr15:40637400-40645800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 10 | chr15:40637400-40649600 | Weak transcription | Spleen | Spleen |
| 11 | chr15:40639400-40644800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 12 | chr15:40640800-40644600 | Weak transcription | Fetal Brain Male | brain |
| 13 | chr15:40641200-40645800 | Weak transcription | Right Ventricle | heart |
| 14 | chr15:40641400-40646200 | Weak transcription | Fetal Heart | heart |
| 15 | chr15:40641600-40649600 | Weak transcription | Esophagus | oesophagus |
| 16 | chr15:40642400-40647000 | Active TSS | Rectal Smooth Muscle | rectum |
| 17 | chr15:40642600-40645800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr15:40642800-40644600 | Active TSS | Colonic Mucosa | Colon |
| 19 | chr15:40643000-40644200 | Active TSS | Fetal Intestine Small | intestine |
| 20 | chr15:40643000-40644600 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 21 | chr15:40643000-40644600 | Active TSS | Rectal Mucosa Donor 31 | rectum |
| 22 | chr15:40643000-40644600 | Active TSS | Stomach Mucosa | stomach |
| 23 | chr15:40643000-40645400 | Active TSS | Fetal Intestine Large | intestine |
| 24 | chr15:40643000-40646200 | Active TSS | Duodenum Mucosa | Duodenum |
| 25 | chr15:40643200-40645800 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 26 | chr15:40643400-40644600 | Active TSS | Sigmoid Colon | Sigmoid Colon |
| 27 | chr15:40643400-40645200 | Active TSS | Small Intestine | intestine |
| 28 | chr15:40643400-40646400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 29 | chr15:40643400-40649800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 30 | chr15:40643600-40644600 | Weak transcription | Gastric | stomach |
| 31 | chr15:40643600-40645800 | Weak transcription | K562 | blood |
