Variant report

Variant rs17674257
Chromosome Location chr16:75339731-75339732
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:75317400-75358000 Weak transcription Fetal Brain Male brain
2 chr16:75324800-75340200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr16:75325200-75340800 Strong transcription iPS-20b Cell Line embryonic stem cell
4 chr16:75329000-75340400 Strong transcription Thymus Thymus
5 chr16:75332000-75339800 Strong transcription iPS-18 Cell Line embryonic stem cell
6 chr16:75332600-75352000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr16:75333000-75339800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr16:75335000-75346400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr16:75336000-75346600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr16:75336600-75343000 Weak transcription Gastric stomach
11 chr16:75336800-75340200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr16:75336800-75346600 Weak transcription Ovary ovary
13 chr16:75337800-75339800 Enhancers Aorta Aorta
14 chr16:75338000-75340200 Enhancers Stomach Mucosa stomach
15 chr16:75338000-75341000 Enhancers NHLF lung
16 chr16:75338000-75342200 Enhancers Brain Hippocampus Middle brain
17 chr16:75338200-75340400 Enhancers Adipose Nuclei Adipose
18 chr16:75338200-75340800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr16:75338200-75341000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr16:75338200-75341000 Enhancers Brain Substantia Nigra brain
21 chr16:75338200-75341000 Enhancers Right Atrium heart
22 chr16:75338200-75341000 Enhancers NH-A brain
23 chr16:75338200-75341200 Enhancers Brain Inferior Temporal Lobe brain
24 chr16:75338400-75340000 Genic enhancers Cortex derived primary cultured neurospheres brain
25 chr16:75338400-75340400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr16:75338400-75340400 Enhancers Esophagus oesophagus
27 chr16:75338400-75340800 Enhancers Pancreatic Islets Pancreatic Islet
28 chr16:75338400-75342200 Enhancers Brain Angular Gyrus brain
29 chr16:75338600-75340600 Enhancers Colon Smooth Muscle Colon
30 chr16:75338600-75340800 Enhancers Left Ventricle heart
31 chr16:75338800-75339800 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum
32 chr16:75338800-75340400 Enhancers Fetal Stomach stomach
33 chr16:75338800-75340400 Enhancers Fetal Thymus thymus
34 chr16:75338800-75340400 Flanking Active TSS Osteobl bone
35 chr16:75338800-75340800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr16:75338800-75341000 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr16:75338800-75341000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr16:75338800-75341000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr16:75338800-75341000 Enhancers Brain Cingulate Gyrus brain
40 chr16:75338800-75341000 Flanking Active TSS HepG2 liver
41 chr16:75338800-75343000 Weak transcription Fetal Muscle Trunk muscle
42 chr16:75338800-75346600 Weak transcription Fetal Brain Female brain
43 chr16:75338800-75349400 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr16:75338800-75349800 Weak transcription Primary B cells from peripheral blood blood
45 chr16:75338800-75351200 Weak transcription Right Ventricle heart
46 chr16:75338800-75426400 Weak transcription H9 Cell Line embryonic stem cell
47 chr16:75339000-75339800 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr16:75339000-75339800 Genic enhancers Primary hematopoietic stem cells short term culture blood
49 chr16:75339000-75340000 Enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr16:75339000-75340200 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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