Variant report

Variant rs17675170
Chromosome Location chr20:16522124-16522125
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16492600-16528800 Weak transcription Primary B cells from cord blood blood
2 chr20:16507400-16527000 Weak transcription Primary B cells from peripheral blood blood
3 chr20:16508400-16536800 Weak transcription Stomach Smooth Muscle stomach
4 chr20:16509200-16553000 Weak transcription Primary T cells from cord blood blood
5 chr20:16511600-16522400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr20:16511600-16549000 Weak transcription Colonic Mucosa Colon
7 chr20:16517800-16534200 Weak transcription Esophagus oesophagus
8 chr20:16518200-16523200 Weak transcription Small Intestine intestine
9 chr20:16518200-16535800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr20:16518800-16534000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr20:16520200-16532000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr20:16520200-16534400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr20:16520400-16523200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr20:16520400-16533800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr20:16520400-16534800 Weak transcription Fetal Intestine Small intestine
16 chr20:16520800-16523200 Weak transcription Primary hematopoietic stem cells blood
17 chr20:16520800-16523400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr20:16520800-16523800 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr20:16521000-16522800 Enhancers Spleen Spleen
20 chr20:16521000-16523800 Enhancers Ovary ovary
21 chr20:16521200-16522800 Enhancers Adipose Nuclei Adipose
22 chr20:16521200-16522800 Enhancers Liver Liver
23 chr20:16521200-16522800 Enhancers Right Atrium heart
24 chr20:16521200-16522800 Enhancers Right Ventricle heart
25 chr20:16521200-16522800 Enhancers Skeletal Muscle Female skeletal muscle
26 chr20:16521200-16523400 Enhancers Psoas Muscle Psoas
27 chr20:16521400-16523400 Enhancers Skeletal Muscle Male skeletal muscle
28 chr20:16521600-16522600 Enhancers Fetal Muscle Leg muscle
29 chr20:16521600-16523400 Enhancers Brain Hippocampus Middle brain
30 chr20:16521600-16523400 Enhancers Left Ventricle heart
31 chr20:16521800-16522600 Enhancers Brain Substantia Nigra brain
32 chr20:16521800-16523400 Enhancers Pancreas Pancrea
33 chr20:16522000-16522200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr20:16522000-16522200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr20:16522000-16522400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr20:16522000-16522400 Enhancers Osteobl bone
37 chr20:16522000-16522600 Enhancers HUES6 Cell Line embryonic stem cell
38 chr20:16522000-16522600 Enhancers Brain Angular Gyrus brain
39 chr20:16522000-16522600 Enhancers Brain Inferior Temporal Lobe brain
40 chr20:16522000-16522600 Enhancers Fetal Muscle Trunk muscle
41 chr20:16522000-16522600 Enhancers Lung lung
42 chr20:16522000-16522800 Enhancers Aorta Aorta
43 chr20:16522000-16523000 Enhancers Brain Anterior Caudate brain
44 chr20:16522000-16523000 Enhancers Brain Cingulate Gyrus brain

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