Variant report

Variant	rs17682361
Chromosome Location	chr1:216967991-216967992
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17043763	1.00[JPT][hapmap]
rs72739417	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72739420	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72739421	0.86[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs17682361	PPP2R5A	cis	cerebellum	SCAN

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216966600-216968600	Enhancers	Fetal Intestine Large	intestine
2	chr1:216966800-216968400	Enhancers	Fetal Intestine Small	intestine
3	chr1:216967000-216968200	Weak transcription	Fetal Muscle Leg	muscle
4	chr1:216967400-216968400	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr1:216967600-216968200	Enhancers	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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