Variant report

Variant rs17700839
Chromosome Location chr17:45899057-45899058
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:45896400-45901000 Weak transcription Aorta Aorta
2 chr17:45897400-45899400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr17:45897400-45899400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
4 chr17:45897400-45899800 Flanking Active TSS Duodenum Mucosa Duodenum
5 chr17:45897400-45900000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
6 chr17:45897800-45899400 Active TSS iPS-18 Cell Line embryonic stem cell
7 chr17:45897800-45899400 Active TSS Stomach Mucosa stomach
8 chr17:45897800-45899600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
9 chr17:45897800-45899600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
10 chr17:45897800-45899800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
11 chr17:45897800-45899800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr17:45898000-45899600 Active TSS iPS-20b Cell Line embryonic stem cell
13 chr17:45898000-45899600 Flanking Active TSS Primary T cells from cord blood blood
14 chr17:45898000-45899600 Flanking Active TSS Primary T cells fromperipheralblood blood
15 chr17:45898000-45899600 Flanking Active TSS Brain Germinal Matrix brain
16 chr17:45898000-45899600 Flanking Active TSS Fetal Muscle Trunk muscle
17 chr17:45898000-45899600 Flanking Active TSS Fetal Muscle Leg muscle
18 chr17:45898000-45899800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
19 chr17:45898000-45899800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr17:45898000-45899800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
21 chr17:45898000-45899800 Flanking Active TSS Stomach Smooth Muscle stomach
22 chr17:45898200-45899200 Active TSS HUES6 Cell Line embryonic stem cell
23 chr17:45898200-45899400 Active TSS HUES48 Cell Line embryonic stem cell
24 chr17:45898200-45899400 Active TSS HUES64 Cell Line embryonic stem cell
25 chr17:45898200-45899600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr17:45898200-45899600 Flanking Active TSS Primary B cells from cord blood blood
27 chr17:45898200-45899600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
28 chr17:45898200-45899600 Active TSS Pancreatic Islets Pancreatic Islet
29 chr17:45898200-45899600 Active TSS Small Intestine intestine
30 chr17:45898200-45899800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr17:45898200-45899800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr17:45898200-45899800 Flanking Active TSS HMEC breast
33 chr17:45898200-45900200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr17:45898400-45899200 Flanking Active TSS Right Ventricle heart
35 chr17:45898400-45899400 Active TSS H9 Cell Line embryonic stem cell
36 chr17:45898400-45899400 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
37 chr17:45898400-45899400 Active TSS Fetal Kidney kidney
38 chr17:45898400-45899400 Active TSS GM12878-XiMat blood
39 chr17:45898400-45899400 Active TSS NHLF lung
40 chr17:45898400-45899600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
41 chr17:45898400-45899600 Flanking Active TSS Primary monocytes fromperipheralblood blood
42 chr17:45898400-45899600 Flanking Active TSS Primary B cells from peripheral blood blood
43 chr17:45898400-45899600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
44 chr17:45898400-45899600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
45 chr17:45898400-45899600 Flanking Active TSS Brain Substantia Nigra brain
46 chr17:45898400-45899600 Flanking Active TSS Fetal Brain Female brain
47 chr17:45898400-45899600 Flanking Active TSS Right Atrium heart
48 chr17:45898400-45899800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr17:45898400-45899800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr17:45898400-45899800 Flanking Active TSS Adipose Nuclei Adipose

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