Variant report
Variant | rs17718518 |
---|---|
Chromosome Location | chr2:20789243-20789244 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:20784600-20794200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
2 | chr2:20785000-20796000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
3 | chr2:20785400-20789400 | Weak transcription | Placenta Amnion | Placenta Amnion |
4 | chr2:20785600-20790200 | Weak transcription | Fetal Intestine Large | intestine |
5 | chr2:20785800-20789800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
6 | chr2:20785800-20790200 | Weak transcription | Fetal Heart | heart |
7 | chr2:20785800-20790600 | Weak transcription | Brain Cingulate Gyrus | brain |
8 | chr2:20785800-20793000 | Weak transcription | Gastric | stomach |
9 | chr2:20785800-20794600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
10 | chr2:20785800-20795200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
11 | chr2:20785800-20796000 | Weak transcription | Aorta | Aorta |
12 | chr2:20786000-20789400 | Weak transcription | Esophagus | oesophagus |
13 | chr2:20786000-20790400 | Weak transcription | Liver | Liver |
14 | chr2:20786000-20790400 | Weak transcription | Fetal Lung | lung |
15 | chr2:20786000-20790400 | Weak transcription | Rectal Smooth Muscle | rectum |
16 | chr2:20786000-20790600 | Weak transcription | Brain Anterior Caudate | brain |
17 | chr2:20786000-20790800 | Weak transcription | Pancreas | Pancrea |
18 | chr2:20786000-20792200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
19 | chr2:20786000-20792800 | Weak transcription | Colonic Mucosa | Colon |
20 | chr2:20786000-20793000 | Weak transcription | Brain Hippocampus Middle | brain |
21 | chr2:20786000-20794200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
22 | chr2:20786000-20795200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
23 | chr2:20786200-20790200 | Weak transcription | Ovary | ovary |
24 | chr2:20786200-20790400 | Weak transcription | Colon Smooth Muscle | Colon |
25 | chr2:20786200-20790400 | Weak transcription | Fetal Intestine Small | intestine |
26 | chr2:20786200-20797600 | Weak transcription | Psoas Muscle | Psoas |
27 | chr2:20786800-20793400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
28 | chr2:20787200-20800200 | Enhancers | Right Ventricle | heart |
29 | chr2:20787400-20789800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
30 | chr2:20787400-20792800 | Weak transcription | Fetal Kidney | kidney |
31 | chr2:20787400-20794800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
32 | chr2:20787800-20789800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
33 | chr2:20787800-20790800 | Weak transcription | Brain Substantia Nigra | brain |
34 | chr2:20788200-20792000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
35 | chr2:20788400-20790800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
36 | chr2:20788400-20791200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
37 | chr2:20788400-20791400 | Enhancers | Right Atrium | heart |
38 | chr2:20788400-20791800 | Enhancers | Left Ventricle | heart |
39 | chr2:20788400-20794200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
40 | chr2:20788400-20794200 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
41 | chr2:20788600-20790000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
42 | chr2:20788600-20791600 | Enhancers | Muscle Satellite Cultured Cells | -- |
43 | chr2:20788800-20789400 | Enhancers | Brain Inferior Temporal Lobe | brain |
44 | chr2:20788800-20789400 | Enhancers | Duodenum Mucosa | Duodenum |
45 | chr2:20788800-20789600 | Enhancers | Stomach Smooth Muscle | stomach |
46 | chr2:20788800-20789800 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
47 | chr2:20788800-20790800 | Transcr. at gene 5' and 3' | HepG2 | liver |
48 | chr2:20788800-20790800 | Enhancers | NH-A | brain |
49 | chr2:20788800-20791000 | Enhancers | Lung | lung |
50 | chr2:20788800-20791400 | Enhancers | Fetal Muscle Leg | muscle |