Variant report

Variant rs17718518
Chromosome Location chr2:20789243-20789244
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20784600-20794200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:20785000-20796000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr2:20785400-20789400 Weak transcription Placenta Amnion Placenta Amnion
4 chr2:20785600-20790200 Weak transcription Fetal Intestine Large intestine
5 chr2:20785800-20789800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr2:20785800-20790200 Weak transcription Fetal Heart heart
7 chr2:20785800-20790600 Weak transcription Brain Cingulate Gyrus brain
8 chr2:20785800-20793000 Weak transcription Gastric stomach
9 chr2:20785800-20794600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr2:20785800-20795200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr2:20785800-20796000 Weak transcription Aorta Aorta
12 chr2:20786000-20789400 Weak transcription Esophagus oesophagus
13 chr2:20786000-20790400 Weak transcription Liver Liver
14 chr2:20786000-20790400 Weak transcription Fetal Lung lung
15 chr2:20786000-20790400 Weak transcription Rectal Smooth Muscle rectum
16 chr2:20786000-20790600 Weak transcription Brain Anterior Caudate brain
17 chr2:20786000-20790800 Weak transcription Pancreas Pancrea
18 chr2:20786000-20792200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr2:20786000-20792800 Weak transcription Colonic Mucosa Colon
20 chr2:20786000-20793000 Weak transcription Brain Hippocampus Middle brain
21 chr2:20786000-20794200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr2:20786000-20795200 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr2:20786200-20790200 Weak transcription Ovary ovary
24 chr2:20786200-20790400 Weak transcription Colon Smooth Muscle Colon
25 chr2:20786200-20790400 Weak transcription Fetal Intestine Small intestine
26 chr2:20786200-20797600 Weak transcription Psoas Muscle Psoas
27 chr2:20786800-20793400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr2:20787200-20800200 Enhancers Right Ventricle heart
29 chr2:20787400-20789800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr2:20787400-20792800 Weak transcription Fetal Kidney kidney
31 chr2:20787400-20794800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr2:20787800-20789800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr2:20787800-20790800 Weak transcription Brain Substantia Nigra brain
34 chr2:20788200-20792000 Bivalent Enhancer Fetal Muscle Trunk muscle
35 chr2:20788400-20790800 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr2:20788400-20791200 Enhancers Skeletal Muscle Male skeletal muscle
37 chr2:20788400-20791400 Enhancers Right Atrium heart
38 chr2:20788400-20791800 Enhancers Left Ventricle heart
39 chr2:20788400-20794200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr2:20788400-20794200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr2:20788600-20790000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:20788600-20791600 Enhancers Muscle Satellite Cultured Cells --
43 chr2:20788800-20789400 Enhancers Brain Inferior Temporal Lobe brain
44 chr2:20788800-20789400 Enhancers Duodenum Mucosa Duodenum
45 chr2:20788800-20789600 Enhancers Stomach Smooth Muscle stomach
46 chr2:20788800-20789800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
47 chr2:20788800-20790800 Transcr. at gene 5' and 3' HepG2 liver
48 chr2:20788800-20790800 Enhancers NH-A brain
49 chr2:20788800-20791000 Enhancers Lung lung
50 chr2:20788800-20791400 Enhancers Fetal Muscle Leg muscle

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